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166
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Comment:
Comment: Problem with tximport and plasmodium falciparum
2 hours ago by
ATpoint
69k
0
votes
1
reply
137
views
Answer:
Answer: How to summarize the expression of a gene when having expression data from diffe
7 hours ago by
ATpoint
69k
0
votes
0
replies
205
views
Comment:
Comment: Differentially gene expression analysis
10 hours ago by
ATpoint
69k
0
votes
1
reply
179
views
Answer:
Answer: docker build Command Works Yet It Does Not Create A Docker Container
12 hours ago by
ATpoint
69k
0
votes
1
reply
131
views
Comment:
Comment: Averaging across multiple proteomic experiments
5 hours ago by
ATpoint
69k
0
votes
1
reply
147
views
Comment:
Comment: FATAL: While performing build: build image size <= 0 - Issues With Singularity
12 hours ago by
ATpoint
69k
0
votes
1
reply
205
views
Answer:
Answer: Differentially gene expression analysis
12 hours ago by
ATpoint
69k
0
votes
0
replies
305
views
Comment:
Comment: Issues With Using Singularity In Order To Run Software "quested access to the re
12 hours ago by
ATpoint
69k
0
votes
1
reply
166
views
Answer:
Answer: Problem with tximport and plasmodium falciparum
12 hours ago by
ATpoint
69k
1
vote
1
reply
372
views
Comment:
Comment: Subbmission Data
1 day ago by
ATpoint
69k
1
vote
1
reply
372
views
Answer:
Answer: Subbmission Data
1 day ago by
ATpoint
69k
1
vote
1
reply
305
views
Answer:
Answer: Issues With Using Singularity In Order To Run Software "quested access to the re
1 day ago by
ATpoint
69k
3
votes
1
reply
155
views
Answer:
Answer: Creating reference genome that includes HIV genome
1 day ago by
ATpoint
69k
1
vote
0
replies
277
views
Answer:
Answer: Can Singularity be installed on a single-node server or does it have to be HPC?
3 days ago by
ATpoint
69k
1
vote
0
replies
190
views
Answer:
Answer: Virtual box
3 days ago by
ATpoint
69k
0
votes
0
replies
289
views
Answer:
Answer: samtools markdup in Rsamtools
4 days ago by
ATpoint
69k
2
votes
2
replies
332
views
Answer:
Answer: To batch correct or analyse separately?
4 days ago by
ATpoint
69k
1
vote
1
reply
360
views
Comment:
Comment: Which file and data structure is used to create volcano plot from scRNA-Seq expe
5 days ago by
ATpoint
69k
1
vote
0
replies
187
views
Comment:
Comment: bwa mem duration?
5 days ago by
ATpoint
69k
0
votes
1
reply
378
views
Comment:
Comment: RNASeq differential expression masked by pathways disregulation
5 days ago by
ATpoint
69k
0
votes
1
reply
378
views
Answer:
Answer: RNASeq differential expression masked by pathways disregulation
5 days ago by
ATpoint
69k
1
vote
1
reply
238
views
Answer:
Answer: want the codes for Deseq2 to perform DEGs.
6 days ago by
ATpoint
69k
0
votes
0
replies
301
views
Comment:
Comment: biological vs. technical definition of "insert size"
6 days ago by
ATpoint
69k
0
votes
1
reply
301
views
Comment:
Comment: biological vs. technical definition of "insert size"
7 days ago by
ATpoint
69k
1
vote
0
replies
140
views
Answer:
Answer: Aspera: Command 'ascp' not found
7 days ago by
ATpoint
69k
1
vote
1
reply
225
views
Comment:
Comment: RNAseq: Scaling or not scaling with rlog transformed counts
7 days ago by
ATpoint
69k
2
votes
1
reply
225
views
Answer:
Answer: RNAseq: Scaling or not scaling with rlog transformed counts
7 days ago by
ATpoint
69k
0
votes
1
reply
270
views
Comment:
Comment: Is there a method to group and summarize the `homer` `findMotifsGenome.pl` outpu
8 days ago by
ATpoint
69k
0
votes
0
replies
1.0k
views
Answer:
Answer: CNVkit error "pysam.utils.SamtoolsError: "samtools returned with error 2: stdout
9 days ago by
ATpoint
69k
0
votes
0
replies
398
views
Comment:
Comment: HISAT2 output direct to bam sorted
9 days ago by
ATpoint
69k
1
vote
0
replies
281
views
Comment:
Comment: how to do a reliable single cell sequencing analysis?
9 days ago by
ATpoint
69k
1
vote
1
reply
281
views
Answer:
Answer: how to do a reliable single cell sequencing analysis?
10 days ago by
ATpoint
69k
3
votes
1
reply
398
views
Answer:
Answer: HISAT2 output direct to bam sorted
11 days ago by
ATpoint
69k
1
vote
1
reply
555
views
Comment:
Comment: bedGraph to bigwig
12 days ago by
ATpoint
69k
1
vote
0
replies
509
views
Answer:
Answer: setting up Kallisto software
12 days ago by
ATpoint
69k
0
votes
0
replies
555
views
Comment:
Comment: bedGraph to bigwig
13 days ago by
ATpoint
69k
0
votes
1
reply
555
views
Comment:
Comment: bedGraph to bigwig
13 days ago by
ATpoint
69k
0
votes
2
replies
555
views
Comment:
Comment: bedGraph to bigwig
13 days ago by
ATpoint
69k
0
votes
0
replies
247
views
Comment:
Comment: FRiP value
13 days ago by
ATpoint
69k
1
vote
0
replies
174
views
Answer:
Answer: DESeq2 for small RNAseq data
13 days ago by
ATpoint
69k
0
votes
1
reply
290
views
Comment:
Comment: differential gene expression pipelines rnaflow vs rnaseq
13 days ago by
ATpoint
69k
1
vote
0
replies
164
views
Comment:
Comment: Which RUVr batch corrected output is better to calculate TPM?
13 days ago by
ATpoint
69k
2
votes
0
replies
446
views
Comment:
Comment: Gene Set Enrichment Analysis, pathway, metabolism
13 days ago by
ATpoint
69k
3
votes
1
reply
446
views
Answer:
Answer: Gene Set Enrichment Analysis, pathway, metabolism
13 days ago by
ATpoint
69k
0
votes
1
reply
333
views
Comment:
Comment: Unknown chromosome results in .narrowPeak files
13 days ago by
ATpoint
69k
1
vote
0
replies
207
views
Comment:
Comment: trying to look the version of the programs under miniconda3 directory
13 days ago by
ATpoint
69k
2
votes
0
replies
186
views
Answer:
Answer: Peak Calling on a single gene?
13 days ago by
ATpoint
69k
4
votes
2
replies
407
views
Comment:
Comment: BULK mRNA-seq with UMIs. Do I need to normalize by gene length?
14 days ago by
ATpoint
69k
4
votes
0
replies
135
views
Answer:
Answer: single pathway score
14 days ago by
ATpoint
69k
0
votes
2
replies
333
views
Comment:
Comment: Unknown chromosome results in .narrowPeak files
14 days ago by
ATpoint
69k
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