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166
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Comment: Comment: Problem with tximport and plasmodium falciparum
2 hours ago by ATpoint 69k
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137
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Answer: Answer: How to summarize the expression of a gene when having expression data from diffe
7 hours ago by ATpoint 69k
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205
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Comment: Comment: Differentially gene expression analysis
10 hours ago by ATpoint 69k
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179
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Answer: Answer: docker build Command Works Yet It Does Not Create A Docker Container
12 hours ago by ATpoint 69k
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131
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Comment: Comment: Averaging across multiple proteomic experiments
5 hours ago by ATpoint 69k
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147
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Comment: Comment: FATAL: While performing build: build image size <= 0 - Issues With Singularity
12 hours ago by ATpoint 69k
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1
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205
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Answer: Answer: Differentially gene expression analysis
12 hours ago by ATpoint 69k
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305
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Comment: Comment: Issues With Using Singularity In Order To Run Software "quested access to the re
12 hours ago by ATpoint 69k
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166
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Answer: Answer: Problem with tximport and plasmodium falciparum
12 hours ago by ATpoint 69k
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1
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372
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Comment: Comment: Subbmission Data
1 day ago by ATpoint 69k
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372
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Answer: Answer: Subbmission Data
1 day ago by ATpoint 69k
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1
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305
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Answer: Answer: Issues With Using Singularity In Order To Run Software "quested access to the re
1 day ago by ATpoint 69k
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155
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Answer: Answer: Creating reference genome that includes HIV genome
1 day ago by ATpoint 69k
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277
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Answer: Answer: Can Singularity be installed on a single-node server or does it have to be HPC?
3 days ago by ATpoint 69k
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190
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Answer: Answer: Virtual box
3 days ago by ATpoint 69k
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289
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Answer: Answer: samtools markdup in Rsamtools
4 days ago by ATpoint 69k
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2
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332
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Answer: Answer: To batch correct or analyse separately?
4 days ago by ATpoint 69k
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360
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Comment: Comment: Which file and data structure is used to create volcano plot from scRNA-Seq expe
5 days ago by ATpoint 69k
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187
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Comment: Comment: bwa mem duration?
5 days ago by ATpoint 69k
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1
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378
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Comment: Comment: RNASeq differential expression masked by pathways disregulation
5 days ago by ATpoint 69k
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1
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378
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Answer: Answer: RNASeq differential expression masked by pathways disregulation
5 days ago by ATpoint 69k
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1
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238
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Answer: Answer: want the codes for Deseq2 to perform DEGs.
6 days ago by ATpoint 69k
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301
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Comment: Comment: biological vs. technical definition of "insert size"
6 days ago by ATpoint 69k
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301
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Comment: Comment: biological vs. technical definition of "insert size"
7 days ago by ATpoint 69k
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140
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Answer: Answer: Aspera: Command 'ascp' not found
7 days ago by ATpoint 69k
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1
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225
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Comment: Comment: RNAseq: Scaling or not scaling with rlog transformed counts
7 days ago by ATpoint 69k
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225
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Answer: Answer: RNAseq: Scaling or not scaling with rlog transformed counts
7 days ago by ATpoint 69k
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270
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Comment: Comment: Is there a method to group and summarize the `homer` `findMotifsGenome.pl` outpu
8 days ago by ATpoint 69k
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1.0k
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Answer: Answer: CNVkit error "pysam.utils.SamtoolsError: "samtools returned with error 2: stdout
9 days ago by ATpoint 69k
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398
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Comment: Comment: HISAT2 output direct to bam sorted
9 days ago by ATpoint 69k
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0
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281
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Comment: Comment: how to do a reliable single cell sequencing analysis?
9 days ago by ATpoint 69k
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1
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281
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Answer: Answer: how to do a reliable single cell sequencing analysis?
10 days ago by ATpoint 69k
3
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1
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398
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Answer: Answer: HISAT2 output direct to bam sorted
11 days ago by ATpoint 69k
1
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1
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555
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Comment: Comment: bedGraph to bigwig
12 days ago by ATpoint 69k
1
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0
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509
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Answer: Answer: setting up Kallisto software
12 days ago by ATpoint 69k
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0
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555
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Comment: Comment: bedGraph to bigwig
13 days ago by ATpoint 69k
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1
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555
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Comment: Comment: bedGraph to bigwig
13 days ago by ATpoint 69k
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2
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555
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Comment: Comment: bedGraph to bigwig
13 days ago by ATpoint 69k
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247
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Comment: Comment: FRiP value
13 days ago by ATpoint 69k
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0
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174
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Answer: Answer: DESeq2 for small RNAseq data
13 days ago by ATpoint 69k
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1
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290
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Comment: Comment: differential gene expression pipelines rnaflow vs rnaseq
13 days ago by ATpoint 69k
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0
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164
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Comment: Comment: Which RUVr batch corrected output is better to calculate TPM?
13 days ago by ATpoint 69k
2
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446
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Comment: Comment: Gene Set Enrichment Analysis, pathway, metabolism
13 days ago by ATpoint 69k
3
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1
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446
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Answer: Answer: Gene Set Enrichment Analysis, pathway, metabolism
13 days ago by ATpoint 69k
0
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1
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333
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Comment: Comment: Unknown chromosome results in .narrowPeak files
13 days ago by ATpoint 69k
1
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0
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207
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Comment: Comment: trying to look the version of the programs under miniconda3 directory
13 days ago by ATpoint 69k
2
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0
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186
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Answer: Answer: Peak Calling on a single gene?
13 days ago by ATpoint 69k
4
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2
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407
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Comment: Comment: BULK mRNA-seq with UMIs. Do I need to normalize by gene length?
14 days ago by ATpoint 69k
4
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135
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Answer: Answer: single pathway score
14 days ago by ATpoint 69k
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2
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333
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Comment: Comment: Unknown chromosome results in .narrowPeak files
14 days ago by ATpoint 69k
8,457 results • Page 1 of 170
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