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Showing :
questions
11
votes
9
replies
8.5k
views
Ribo-seq Analysis software
ribo-seq
updated 24 months ago by
Ram
43k • written 9.7 years ago by
Anna S
▴ 510
7
votes
5
replies
4.0k
views
Has anybody used TEToolkit successfully to quantify transposable elements?
transposable element
updated 7.7 years ago by
Devon Ryan
104k • written 7.9 years ago by
Anna S
▴ 510
1
vote
2
replies
2.3k
views
juncBASE (Junction-Based Analysis of Splicing Events) bugs?
Alternative-Splicing
RNA-seq
juncBASE
updated 18 months ago by
Ram
43k • written 8.7 years ago by
Anna S
▴ 510
2
votes
9
replies
2.8k
views
Virus mutation definition sequencing
virus
sequencing
mutation
updated 20 months ago by
Ram
43k • written 8.4 years ago by
Anna S
▴ 510
38
votes
26
replies
11k
views
Remove optical duplicates from bam file
sequencing
updated 21 months ago by
Ram
43k • written 9.6 years ago by
Anna S
▴ 510
2
votes
3
replies
3.2k
views
ChIP-Seq duplicates metrics/qa
ChIP-Seq
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
Anna S
▴ 510
3
votes
5
replies
2.5k
views
Generating GTF (exon, etc.) files for species not in UCSC genome browser
GTF
RNA-Seq
Assembly
updated 2.3 years ago by
Ram
43k • written 9.7 years ago by
Anna S
▴ 510
1
vote
2
replies
2.8k
views
Bismark reads failing to align
bismark
fastqc
updated 2.5 years ago by
Ram
43k • written 9.8 years ago by
Anna S
▴ 510
8
votes
11
replies
5.5k
views
Virus Sequencing de novo vs reference based assembly
de-novo
ngs
virus
updated 2.6 years ago by
Ram
43k • written 9.9 years ago by
Anna S
▴ 510
9
votes
4
replies
15k
views
Picard Sortsam Complains That Bam File Generated By Picard Addorreplacereadgroups Is Truncated
picard
gatk
bam
updated 10.5 years ago by
Biostar
20 • written 12.2 years ago by
Anna S
▴ 510
5
votes
7
replies
2.9k
views
Client.Authfailure When Running Pathseq Software
cloud
12.6 years ago by
Anna S
▴ 510
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