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0
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7
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1.5k
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write Pindel error to text file
software error
updated 7.0 years ago by 89k • written 7.0 years ago by ▴ 50
0
votes
1
reply
3.9k
views
Comment: C: finding mutations in rna-seq transcriptome
7.0 years ago by genya35 ▴ 50
0
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1
reply
3.9k
views
Comment: C: finding mutations in rna-seq transcriptome
7.0 years ago by genya35 ▴ 50
6
votes
11
replies
3.9k
views
finding mutations in rna-seq transcriptome
RNA-Seq
updated 7.0 years ago by ★ 2.6k • written 7.0 years ago by ▴ 50
4
votes
1
reply
4.0k
views
how to use bgzip with tabix docker image
software error
updated 7.0 years ago by ▴ 270 • written 7.0 years ago by ▴ 50
0
votes
1
reply
2.2k
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Comment: C: docker container for Pindel
7.0 years ago by genya35 ▴ 50
0
votes
3
replies
2.2k
views
docker container for Pindel
software error
7.0 years ago by genya35 ▴ 50
0
votes
0
replies
3.7k
views
Comment: C: samtools and docker
7.0 years ago by genya35 ▴ 50
0
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1
reply
3.7k
views
Comment: C: samtools and docker
7.0 years ago by genya35 ▴ 50
1
vote
4
replies
3.7k
views
samtools and docker
software docker
updated 7.0 years ago by ★ 2.2k • written 7.0 years ago by ▴ 50
0
votes
1
reply
6.2k
views
Comment: C: how to run bioinformatics tools via docker
7.0 years ago by genya35 ▴ 50
7
votes
14
replies
6.2k
views
7 follow
how to run bioinformatics tools via docker
RNA-Seq
7.0 years ago by genya35 ▴ 50
0
votes
1
reply
6.2k
views
Comment: A: how to run bioinformatics tools via docker
7.0 years ago by genya35 ▴ 50
0
votes
1
reply
6.2k
views
Comment: C: how to run bioinformatics tools via docker
7.1 years ago by genya35 ▴ 50
0
votes
1
reply
6.2k
views
Comment: C: how to run bioinformatics tools via docker
7.1 years ago by genya35 ▴ 50
0
votes
1
reply
6.2k
views
Comment: C: how to run bioinformatics tools via docker
7.1 years ago by genya35 ▴ 50
0
votes
1
reply
1.9k
views
Star-Fusion last-matching gene pairs file
RNA-Seq
updated 7.1 years ago by ▴ 400 • written 7.1 years ago by ▴ 50
0
votes
1
reply
1.9k
views
identifying indels/novel fusions in somatic tumor/normal transcriptome RNA-seq Illumina data
next-gen
updated 7.4 years ago by 89k • written 7.4 years ago by ▴ 50
0
votes
0
replies
4.2k
views
Comment: C: how to capture vcf's INFO field with bcftools
7.5 years ago by genya35 ▴ 50
1
vote
2
replies
4.2k
views
how to capture vcf's INFO field with bcftools
software error
updated 7.5 years ago by 166k • written 7.5 years ago by ▴ 50
0
votes
0
replies
3.1k
views
Comment: C: How to achieve the same alignment with HiSAT2 command line vs. HiSAT2 Galaxy
updated 7.6 years ago by 151k • written 7.6 years ago by ▴ 50
0
votes
1
reply
3.1k
views
Comment: C: How to achieve the same alignment with HiSAT2 command line vs. HiSAT2 Galaxy
updated 7.6 years ago by 151k • written 7.6 years ago by ▴ 50
2
votes
5
replies
3.1k
views
How to achieve the same alignment with HiSAT2 command line vs. HiSAT2 Galaxy
RNA-Seq
updated 7.6 years ago by 105k • written 7.6 years ago by ▴ 50
0
votes
0
replies
16k
views
Comment: C: hisat2 command line fastq to bam
7.6 years ago by genya35 ▴ 50
0
votes
2
replies
16k
views
Comment: C: hisat2 command line fastq to bam
7.6 years ago by genya35 ▴ 50
2
votes
6
replies
16k
views
hisat2 command line fastq to bam
RNA-Seq
7.6 years ago by genya35 ▴ 50
1
vote
2
replies
1.8k
views
Indel detectors for Ion Torrent data
indel
updated 7.6 years ago by 89k • written 7.6 years ago by ▴ 50
0
votes
1
reply
4.2k
views
Comment: C: how to make a .bam file from fastQ for RNA-seq ion torrent with BBmap
7.6 years ago by genya35 ▴ 50
0
votes
1
reply
2.5k
views
Comment: C: how to make short custom reference sequence to use in RNA-seq alignment
7.6 years ago by genya35 ▴ 50
0
votes
1
reply
4.2k
views
Comment: C: how to make a .bam file from fastQ for RNA-seq ion torrent with BBmap
7.6 years ago by genya35 ▴ 50
0
votes
1
reply
2.5k
views
Comment: C: how to make short custom reference sequence to use in RNA-seq alignment
7.6 years ago by genya35 ▴ 50
0
votes
5
replies
2.5k
views
how to make short custom reference sequence to use in RNA-seq alignment
reference sequence
7.6 years ago by genya35 ▴ 50
0
votes
1
reply
1.9k
views
Comment: C: how to optimize Tophat for targeted RNA data analysis
7.6 years ago by genya35 ▴ 50
2
votes
1
reply
2.6k
views
RNA STAR error on Gallaxy
star
updated 7.6 years ago by 105k • written 7.6 years ago by ▴ 50
0
votes
1
reply
4.2k
views
Comment: C: how to make a .bam file from fastQ for RNA-seq ion torrent with BBmap
7.6 years ago by genya35 ▴ 50
0
votes
1
reply
1.9k
views
Comment: C: how to optimize Tophat for targeted RNA data analysis
7.6 years ago by genya35 ▴ 50
0
votes
1
reply
1.9k
views
Comment: C: how to optimize Tophat for targeted RNA data analysis
updated 7.6 years ago by 151k • written 7.6 years ago by ▴ 50
2
votes
9
replies
1.9k
views
how to optimize Tophat for targeted RNA data analysis
RNA-Seq
updated 7.6 years ago by 89k • written 7.6 years ago by ▴ 50
0
votes
1
reply
1.9k
views
Comment: C: how to optimize Tophat for targeted RNA data analysis
7.6 years ago by genya35 ▴ 50
0
votes
1
reply
4.2k
views
Comment: C: how to make a .bam file from fastQ for RNA-seq ion torrent with BBmap
7.6 years ago by genya35 ▴ 50
0
votes
1
reply
4.2k
views
Comment: C: how to make a .bam file from fastQ for RNA-seq ion torrent with BBmap
7.6 years ago by genya35 ▴ 50
0
votes
1
reply
4.2k
views
Comment: C: how to make a .bam file from fastQ for RNA-seq ion torrent with BBmap
7.6 years ago by genya35 ▴ 50
0
votes
1
reply
4.2k
views
Comment: C: how to make a .bam file from fastQ for RNA-seq ion torrent with BBmap
7.6 years ago by genya35 ▴ 50
0
votes
1
reply
2.6k
views
Comment: C: pindel not picking up on a lab-made gene knockout deletion
7.6 years ago by genya35 ▴ 50
0
votes
15
replies
4.2k
views
how to make a .bam file from fastQ for RNA-seq ion torrent with BBmap
RNA-Seq
7.6 years ago by genya35 ▴ 50
0
votes
0
replies
1.5k
views
Answer: A: Best way to align RNA unaligned .ubam files from Ion Torrent
7.6 years ago by genya35 ▴ 50
0
votes
2
replies
1.5k
views
Best way to align RNA unaligned .ubam files from Ion Torrent
next-gen
7.6 years ago by genya35 ▴ 50
0
votes
1
reply
2.6k
views
Comment: C: pindel not picking up on a lab-made gene knockout deletion
7.6 years ago by genya35 ▴ 50
0
votes
0
replies
1.5k
views
Comment: C: how to bypass Pindel error
7.6 years ago by genya35 ▴ 50
0
votes
2
replies
1.5k
views
how to bypass Pindel error
software error
7.6 years ago by genya35 ▴ 50
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