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questions
0
votes
6
replies
1.7k
views
how can i convert my gene list to a format that reactome recognises?
gene
pathway-analysis
reactome
updated 22 months ago by
Ram
39k • written 7.1 years ago by
Learner
▴ 260
0
votes
3
replies
736
views
survival analysis with several conditions
R
updated 2.9 years ago by
Biostar
20 • written 3.0 years ago by
Learner
▴ 260
5
votes
8
replies
1.0k
views
how to perform survival analysis on a corrected and structured data
R
updated 3.1 years ago by
Kevin Blighe
85k • written 3.1 years ago by
Learner
▴ 260
2
votes
3
replies
708
views
how to find a pathway using a set of metabolites
R
updated 3.5 years ago by
bbmisraccb
▴ 70 • written 3.5 years ago by
Learner
▴ 260
0
votes
6
replies
1.4k
views
search for the published sequences
sequence
updated 4.1 years ago by
Biostar
20 • written 7.0 years ago by
Learner
▴ 260
9
votes
11
replies
2.5k
views
A simple regression in R
R
4.1 years ago by
Learner
▴ 260
9
votes
11
replies
975
views
evolution of gene
genome
updated 4.2 years ago by
h.mon
34k • written 4.2 years ago by
Learner
▴ 260
3
votes
1
reply
6.3k
views
index older than input file
genome
updated 4.2 years ago by
Pierre Lindenbaum
154k • written 4.2 years ago by
Learner
▴ 260
4
votes
4
replies
2.7k
views
Key DP found in VariantContext field FILTER error
genome
updated 4.2 years ago by
Pierre Lindenbaum
154k • written 4.2 years ago by
Learner
▴ 260
0
votes
1
reply
524
views
what is the best way to combine several samples based on allele
genome
4.2 years ago by
Learner
▴ 260
5
votes
7
replies
2.3k
views
how can I understand the barcode in TCGA
genomics
updated 4.2 years ago by
Kevin Blighe
85k • written 4.2 years ago by
Learner
▴ 260
1
vote
7
replies
676
views
databases for any specific gene
genomics
updated 4.2 years ago by
pltbiotech_tkarthi
▴ 180 • written 4.3 years ago by
Learner
▴ 260
0
votes
3
replies
740
views
how can I use the BQSR result for further analysis
genomics
4.3 years ago by
Learner
▴ 260
7
votes
18
replies
1.3k
views
make a different color for a given amino acid
perl
updated 4.3 years ago by
Joe
21k • written 4.3 years ago by
Learner
▴ 260
5
votes
16
replies
1.4k
views
how to count the nucleotide frequency of paired ended fasta files
genomics
perl
updated 4.3 years ago by
h.mon
34k • written 4.3 years ago by
Learner
▴ 260
1
vote
2
replies
619
views
how should one treat samples in sequencing
genomics
4.3 years ago by
Learner
▴ 260
1
vote
3
replies
4.7k
views
how to perform the RealignerTargetCreator when there is not this algorithm anymore
genomics
4.3 years ago by
Learner
▴ 260
5
votes
10
replies
1.1k
views
Picard PCR duplicate gives an error
genomics
4.3 years ago by
Learner
▴ 260
2
votes
19
replies
1.0k
views
how to go from aligning forward when analyzing whole exome sequencing
genomics
updated 4.3 years ago by
manuel.belmadani
★ 1.3k • written 4.3 years ago by
Learner
▴ 260
4
votes
10
replies
898
views
exome sequencing for pair sample
genome
4.3 years ago by
Learner
▴ 260
0
votes
4
replies
1.5k
views
convert protein accession number to description
gene
updated 4.4 years ago by
GenoMax
129k • written 4.4 years ago by
Learner
▴ 260
0
votes
1
reply
1.1k
views
reterive data from UniProt
gene
4.4 years ago by
Learner
▴ 260
5
votes
19
replies
1.2k
views
how to find a region of sequence based on region
protein
gene
4.4 years ago by
Learner
▴ 260
2
votes
8
replies
972
views
uniprot protein information about reactions
gene
4.5 years ago by
Learner
▴ 260
8
votes
11
replies
8.2k
views
annotation - biomaRt - getBM - multiple entrez ID
genome
biomart
entrez
updated 4.5 years ago by
Emily
23k • written 4.5 years ago by
Learner
▴ 260
7
votes
16
replies
3.3k
views
8 follow
How to retrieve sets of protein sequences?
uniprot
updated 9 months ago by
Ram
39k • written 4.5 years ago by
Learner
▴ 260
15
votes
9
replies
7.2k
views
6 follow
How to extract all attribute from Biomart?
r
biomart
written 4.5 years ago by
Learner
▴ 260
4
votes
17
replies
1.8k
views
extract information from Uniprot
genome
updated 4.5 years ago by
sammer.kamal91
▴ 10 • written 4.5 years ago by
Learner
▴ 260
3
votes
2
replies
2.9k
views
what is the problem with seqinr query function ?
r
software error
updated 4.8 years ago by
Mark
★ 1.2k • written 7.0 years ago by
Learner
▴ 260
3
votes
14
replies
1.6k
views
how to find metabolites
genomics
metabolomics
4.9 years ago by
Learner
▴ 260
4
votes
19
replies
1.4k
views
why DEseq2 does not care about the condition?
Genomics
DESeq2
updated 4.9 years ago by
Ram
39k • written 4.9 years ago by
Learner
▴ 260
0
votes
10
replies
1.3k
views
breast cancer transcriptome
RNA-Seq
updated 5.0 years ago by
ivanarg2
▴ 80 • written 5.1 years ago by
Learner
▴ 260
3
votes
5
replies
2.5k
views
extract TCGA data
genomics
updated 5.1 years ago by
svlachavas
▴ 770 • written 5.1 years ago by
Learner
▴ 260
6
votes
4
replies
1.3k
views
How to retrieve accession from Uniprot?
Genome proteome
R
Uniport
updated 5.2 years ago by
c.chakraborty
▴ 170 • written 5.2 years ago by
Learner
▴ 260
0
votes
2
replies
942
views
how can I perform gene onthology
R
RNA-Seq
updated 5.2 years ago by
Joe
▴ 40 • written 5.2 years ago by
Learner
▴ 260
3
votes
3
replies
2.1k
views
gene ortholog conversion
gene
RNA-Seq
genome
updated 5.3 years ago by
Rahul Sharma
▴ 650 • written 5.3 years ago by
Learner
▴ 260
5
votes
15
replies
4.8k
views
how can I align several fastq files with hisat2 and get htseq-count
RNA-Seq
5.3 years ago by
Learner
▴ 260
5
votes
4
replies
966
views
how can I analysis data from ebi.uk
RNA-Seq
updated 5.3 years ago by
Kritika
▴ 260 • written 5.3 years ago by
Learner
▴ 260
0
votes
19
replies
1.1k
views
map fasts files
RNA-Seq
FASTQ
R
5.3 years ago by
Learner
▴ 260
2
votes
13
replies
3.7k
views
survival analysis error
RNA-Seq
r
updated 5.3 years ago by
Kevin Blighe
85k • written 5.3 years ago by
Learner
▴ 260
3
votes
3
replies
1.2k
views
a code for htseq analysis
RNA-Seq
5.4 years ago by
Learner
▴ 260
0
votes
3
replies
1.3k
views
how to set the design in limma
limma
5.4 years ago by
Learner
▴ 260
0
votes
8
replies
1.3k
views
annotation issue from Ensemble ID to gene name
RNA-Seq
genome
5.4 years ago by
Learner
▴ 260
6
votes
20
replies
4.4k
views
how to annotate RNA-seq
RNA-Seq
updated 5.4 years ago by
Devon Ryan
103k • written 5.4 years ago by
Learner
▴ 260
0
votes
2
replies
920
views
how to make a graph from CoIP
protein
proteomics
updated 5.4 years ago by
Jean-Karim Heriche
26k • written 5.4 years ago by
Learner
▴ 260
4
votes
5
replies
1.1k
views
what data normaly you use for analysis and how
RNA-Seq
updated 5.4 years ago by
WouterDeCoster
47k • written 5.4 years ago by
Learner
▴ 260
4
votes
3
replies
826
views
how to proceed in order to find gene regulation
genomics
RNA-Seq
5.4 years ago by
Learner
▴ 260
0
votes
4
replies
1.7k
views
how can I select WT and Mutated samples
genome
RNA-Seq
updated 5.4 years ago by
Kevin Blighe
85k • written 5.4 years ago by
Learner
▴ 260
1
vote
4
replies
2.4k
views
finding mutation from RNA seq data
RNA-Seq
updated 5.4 years ago by
Medhat
9.6k • written 5.4 years ago by
Learner
▴ 260
2
votes
5
replies
1.2k
views
which file to use for analysis
RNA-Seq
updated 5.4 years ago by
Kevin Blighe
85k • written 5.4 years ago by
Learner
▴ 260
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