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Posts by william.s.hayes
... I'm trying to figure out how to enumerate the Reactome reactions that have DefinedSets in their catalysts, inputs or outputs. A DefinedSet is defined as a set of reaction members that can be substituted one at a time in the reaction. Some reactions have multiple levels of nested complexes with Defi ...
Answer: A: Biopax vs BEL format
... As one of the OpenBEL community members, I agree with what Gary has said. BioPax is much more structured and descriptive in regards to capturing pathways. BEL is designed for more of an overall view of biology representing multi-scale qualitative biology from molecular interactions to associating ...
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