User: majuang66

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majuang6690
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Posts by majuang66

<prev • 11 results • page 1 of 2 • next >
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Comment: A: Pathway Enrichment Analysis, Clustering and Scoring with pathfindR
... Your post is great and I need this information and tutorial. I appreciate. ...
written 22 months ago by majuang6690
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Comment: C: From Data import to Normalization in Microarray Analysis using in R (Part I)
... Thank you for your reply. I have studied english everyday! ...
written 2.1 years ago by majuang6690
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Error in rDiff for quantifying RNA isoforms
... I am trying to use rDiff for quantifying RNA isoforms. I have a problems during compiling. 1. make 2. echo Entering /.mex 3. Entering ./mex 4. cd mex; make matlab 5. make[1]: Entering directory '/data/rDiff/mex' 6. rm -f *.o 7. g -O get_read.cpp ......................... 8. make[1]: g: comma ...
software error rna-seq written 4.0 years ago by majuang6690
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Comment: C: Rembrandt Glioma Data Analysis (PART I) - Are Gender specific genes related to c
... Your comment is good. Removal of samples could be performed in R using target file. Actually, this method is easy and good. In case of small sample, I use Excel program. But, I will post the practise of R for sample removal than Excel. ...
written 4.3 years ago by majuang6690
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Comment: C: Rembrandt Glioma Data Analysis (PART I) - Are Gender specific genes related to c
... Thank you^_^!! Your comment is correct. ...
written 4.3 years ago by majuang6690
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Tutorial: Rembrandt Glioma Data Analysis (PART II) - Are Gender specific genes related to cancer ?
... I post Rembrandt Glioma Data Analysis (PART II) - "Are Gender specific genes related to cancer ?" At PART I, I post that Rembrandt Glioma Data is clusterable. Next, If the data is clusterable, how do we determine the optimal number of cluster? # Open the R program # required library library(factoex ...
gene R tutorial rembrandt written 4.3 years ago by majuang6690
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Tutorial: Rembrandt Glioma Data Analysis (PART I) - Are Gender specific genes related to cancer ?
... I post "Tutorial: Importance of Array Quality Control - arrayQualityMetrics (PART I), https://www.biostars.org/p/198476/". I have analyzed the Rembrandt Data (Brain tumor), to date, to find new insight of Glioma. This post is a part of my analysis related to Brain tumor. In conclusion, this result i ...
gene R tutorial rembrandt written 4.3 years ago by majuang6690 • updated 3.4 years ago by wq061000
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Tutorial: Importance of Array Quality Control - arrayQualityMetrics (PART I)
... Today's topic is the importance of array quality control. Many articles and websites related to microarray analysis have demonstrated that array quality control is privotal process involved in improvement of identification of differential gene expression. I introduce one example associated with arra ...
gene R tutorial written 4.3 years ago by majuang6690 • updated 4.3 years ago by genomax91k
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Tutorial: Clustering and results Display from PART II (PART III) - MeV software version
... #PART I - https://www.biostars.org/p/196330/ #PART II - https://www.biostars.org/p/196354/ I prepared the data from PART II. I think that data presentation is important for understanding the results in large data. I display clustering results through MeV software (free). From PART II, I selected 212 ...
gene R tutorial written 4.4 years ago by majuang6690
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Tutorial: From Genefiltering to Results storgae in Microarray Analysis using in R (Part II) - FARMS
... # Start From Data import to Normalization in Microarray Analysis using in R (Part II) - FARMS # biocLite ("farms") # library (farms) # mydata_GSE4536_farms <- qFarms(mydata_GSE4536) # Genefiltering INIs<-INIcalls(mydata_GSE4536_farms) summary (INIs) Informative ...
gene R tutorial written 4.4 years ago by majuang6690 • updated 4.4 years ago by Devon Ryan97k

Latest awards to majuang66

Popular Question 2.5 years ago, created a question with more than 1,000 views. For Clustering and results Display from PART II (PART III) - MeV software version
Popular Question 2.7 years ago, created a question with more than 1,000 views. For Importance of Array Quality Control - arrayQualityMetrics (PART I)
Popular Question 3.8 years ago, created a question with more than 1,000 views. For From Data import to Normalization in Microarray Analysis using in R (Part I)

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