User: dv.venuto

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dv.venuto0
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Posts by dv.venuto

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TFBS Enrichment In Rhesus
... Hello, I am preforming a TFBS enrichment analysis using genomic coordinates. I am looking for TFBS coordinate data in Macaque immune cell lines. I am using ENCODE for the human data but am having difficulty finding any in Macaque publicly. I was wondering if a database is available? Thank you ...
binding factor sites chip-seq rna-seq written 2.8 years ago by dv.venuto0
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Answer: A: Large Sample Size RNA-Seq Datasets?
... bump ...
written 2.9 years ago by dv.venuto0
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Comment: C: KEGG Gene Regulation Information
... Thank you! Is it possible to access raw text data containing this information from cytoscape. Also when I provide a list of gene IDs it only visualizes which pathways they are associated with and the interactions between the pathways. ...
written 2.9 years ago by dv.venuto0
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KEGG Gene Regulation Information
... I was wondering if it was possible to access the gene regulation information in KEGG (ie. not just the genes associated with the pathway, but which genes regulate each other also). Is this data available in raw format? ...
gene R kegg rna-seq written 2.9 years ago by dv.venuto0 • updated 2.9 years ago by bharata1803420
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Large Sample Size RNA-Seq Datasets?
... Are there any publicly available RNA-seq datasets that have a large number of samples per treatment. I am looking for a training set to validate a machine learning algorithm with so large differences in expression would be best (perhaps multiple cell types?). ...
sample size large rna-seq written 2.9 years ago by dv.venuto0 • updated 2.9 years ago by WouterDeCoster39k

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