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Comment: C: Gene set enrichment analysis input data
2.3 years ago by ATCG ▴ 370
2
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4
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1.4k
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Gene set enrichment analysis input data
GSE DESeq2
2.3 years ago by ATCG ▴ 370
1
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1
reply
722
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Infer strandedness of my single-end RNA-Seq data
RNA-Seq HISAT2 strandedness
updated 2.3 years ago by ★ 3.9k • written 2.3 years ago by ▴ 370
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0
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Comment: C: Which strand specific option need to be used with HISAT2?
2.3 years ago by ATCG ▴ 370
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0
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1.1k
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Comment: C: File conversion in bash, discrepancy in number of lines after conversion.
2.3 years ago by ATCG ▴ 370
0
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1
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1.1k
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Comment: C: File conversion in bash, discrepancy in number of lines after conversion.
2.3 years ago by ATCG ▴ 370
0
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0
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1.1k
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Comment: C: File conversion in bash, discrepancy in number of lines after conversion.
2.3 years ago by ATCG ▴ 370
0
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0
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1.1k
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Comment: C: File conversion in bash, discrepancy in number of lines after conversion.
2.3 years ago by ATCG ▴ 370
0
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1
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1.1k
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Comment: C: File conversion in bash, discrepancy in number of lines after conversion.
2.3 years ago by ATCG ▴ 370
0
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1
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1.1k
views
Comment: C: File conversion in bash, discrepancy in number of lines after conversion.
2.3 years ago by ATCG ▴ 370
17
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26
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1.1k
views
File conversion in bash, discrepancy in number of lines after conversion.
file conversion csv txt
updated 2.3 years ago by 11k • written 2.3 years ago by ▴ 370
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3
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1.1k
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Comment: C: file conversion in bash
2.3 years ago by ATCG ▴ 370
0
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2
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1.1k
views
Comment: C: file conversion in bash
2.3 years ago by ATCG ▴ 370
0
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1
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1.1k
views
Comment: C: file conversion in bash
2.3 years ago by ATCG ▴ 370
0
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1
reply
1.1k
views
Comment: C: file conversion in bash
2.3 years ago by ATCG ▴ 370
1
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0
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1.9k
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Comment: C: ReactomePA enrichPathway function
2.3 years ago by ATCG ▴ 370
0
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1
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92k
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Answer: A: The Biostar Handbook. A bioinformatics e-book for beginners.
2.3 years ago by ATCG ▴ 370
0
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2
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1.9k
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Comment: C: ReactomePA enrichPathway function
2.3 years ago by ATCG ▴ 370
0
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1
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2.4k
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Comment: C: Selecting the background for GO enrichment analysis (proteomics)
2.3 years ago by ATCG ▴ 370
0
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1
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2.4k
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Comment: C: Selecting the background for GO enrichment analysis (proteomics)
2.3 years ago by ATCG ▴ 370
0
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0
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18k
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Comment: C: Selection Of Background Gene Set In Enrichment Analysis
2.3 years ago by ATCG ▴ 370
4
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5
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1.9k
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ReactomePA enrichPathway function
ReactomePA enrichPathway
2.3 years ago by ATCG ▴ 370
1
vote
6
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546
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Filter fastq files
Fastq trimmomatic
updated 2.3 years ago by 94k • written 2.3 years ago by ▴ 370
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0
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546
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Comment: C: Filter fastq files
2.3 years ago by ATCG ▴ 370
0
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0
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716
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Comment: A: over-represented is not removed after trimmomatic
2.3 years ago by ATCG ▴ 370
0
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2
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716
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over-represented is not removed after trimmomatic
trimmomatic fastqc
2.3 years ago by ATCG ▴ 370
2
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2
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564
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Is indexing a genome the same as annotating a genome?
samtools index genome indexing
2.3 years ago by ATCG ▴ 370
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0
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3.8k
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Comment: C: DESeq2 Error: package or namespace load failed for 'DESeq2'
2.3 years ago by ATCG ▴ 370
2
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4
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3.8k
views
DESeq2 Error: package or namespace load failed for 'DESeq2'
RNA-Seq DESeq2 image not found
updated 2.3 years ago by 4.0k • written 2.3 years ago by ▴ 370
0
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1
reply
894
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Comment: C: Drosophila reference genomes
2.3 years ago by ATCG ▴ 370
0
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1
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594
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Comment: C: How to recognize single-end fastq files
2.3 years ago by ATCG ▴ 370
2
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2
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2.3k
views
Do illumina instruments generate four fastq files per sample?
Fasq Illumina lane
updated 2.3 years ago by 118k • written 2.3 years ago by ▴ 370
2
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4
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594
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How to recognize single-end fastq files
RNA-Seq Fastq single-end
updated 2.3 years ago by 118k • written 2.3 years ago by ▴ 370
0
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0
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838
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Comment: C: Pathway vs Network
2.3 years ago by ATCG ▴ 370
5
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2
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838
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Pathway vs Network
Pathway Networks RNA-Seq
updated 2.3 years ago by 15k • written 2.3 years ago by ▴ 370
0
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0
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894
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Comment: C: Drosophila reference genomes
2.3 years ago by ATCG ▴ 370
0
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2
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894
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Comment: C: Drosophila reference genomes
2.3 years ago by ATCG ▴ 370
8
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8
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894
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Drosophila reference genomes
genome Drosophila Model organisms Annotation
updated 2.3 years ago by 118k • written 2.3 years ago by ▴ 370
0
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2
replies
3.0k
views
Download NCBI GEO dataset
RNA-Seq GEO GSE
updated 2.3 years ago by ▴ 540 • written 2.3 years ago by ▴ 370
0
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0
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7.1k
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Comment: C: Remove Blacklist regions from ChIP-seq Data
updated 2.8 years ago by 36k • written 6.1 years ago by ▴ 370
0
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3
replies
809
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Extracting related sequences from a FASTA file
Sequence comparizon Data mining kmer
updated 3.5 years ago by 20 • written 3.7 years ago by ▴ 370
1
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3
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3.0k
views
Filter out related individuals from a vcf file using Plink or Hail
Hail Plink VCF
updated 3.6 years ago by 11k • written 4.7 years ago by ▴ 370
4
votes
6
replies
1.5k
views
Bulk primer design
primers bulk FASTA kmer
updated 3.7 years ago by 147k • written 3.7 years ago by ▴ 370
0
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1
reply
797
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Comment: C: where to keep scripts for new software
3.8 years ago by ATCG ▴ 370
1
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4
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797
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where to keep scripts for new software
$PATH Unix install
3.8 years ago by ATCG ▴ 370
4
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0
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132k
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Answer: A: Generate Vcf.Gz File And Its Index File Vcf.Gz.Tbi
updated 3.9 years ago by 11k • written 4.9 years ago by ▴ 370
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0
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989
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Comment: C: Pacbio inversion visualization and IGV
3.9 years ago by ATCG ▴ 370
3
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3
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1.8k
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GMAP download page
RNA-Seq GMAP PacBio
3.9 years ago by ATCG ▴ 370
0
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1
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1.8k
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Comment: C: GMAP download page
3.9 years ago by ATCG ▴ 370
0
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2
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2.0k
views
Answer: A: differential gene expression analysis
4.2 years ago by ATCG ▴ 370
167 results • Page 2 of 4
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