User: vincenzo.bonnici

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Posts by vincenzo.bonnici

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Comment: C: Illumina mate-pair reads with TakeABreak
... TakeABreak is a tool developed on top of GATB https://gatb.inria.fr/software/takeabreak/ It takes the advantages of the succinct representation of De Bruijn graph provided by GTAB in order to find breakpoints of genomic structural variants, in particular inversions. It think the missing feature al ...
written 15 months ago by vincenzo.bonnici0
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Illumina mate-pair reads with TakeABreak
... Hi, is there any way to let TakeABreak working on Illumina mate pair reads? If not, is there a consolidated pipeline that I can use to preprocess my reads for using them in TakeABreak? Thank you. ...
gatb takeabreak written 15 months ago by vincenzo.bonnici0 • updated 15 months ago by claire.lemaitre100

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