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Answer: A: Empty output from MACS2 when using control
updated 4.3 years ago by 43k • written 6.6 years ago by ▴ 170
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1.5k
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Comment: C: Remove batch effect between MoGene-1_1-st and Mouse430_2 Affymetrix
updated 4.4 years ago by 43k • written 8.5 years ago by ▴ 170
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1
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183k
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Answer: A: How to download raw sequence data from GEO/SRA
updated 5.2 years ago by 43k • written 8.1 years ago by ▴ 170
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2.9k
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Answer: A: Visualize smooth ChIP peaks with Homer makeUCSCfile
6.6 years ago by macmath ▴ 170
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Comment: A: interpretation Abyss stats
6.7 years ago by macmath ▴ 170
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Comment: C: How to filter subnetworks associated to specific cell type from human homo sapie
6.7 years ago by macmath ▴ 170
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1.5k
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Comment: C: How to filter subnetworks associated to specific cell type from human homo sapie
6.7 years ago by macmath ▴ 170
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4
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1.5k
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How to filter subnetworks associated to specific cell type from human homo sapiens PPI network
PPInetwork proteome
updated 6.7 years ago by 27k • written 6.7 years ago by ▴ 170
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1
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7.7k
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Comment: Comment: To get genes for each clusters from heatmap
updated 17 months ago by 43k • written 6.8 years ago by ▴ 170
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3.6k
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Comment: C: Heatmap for RNA-Seq data
6.8 years ago by macmath ▴ 170
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Answer: A: Biomart Bioconductor - Retrieving All Entrezgenes Of Hsapiens_Gene_Ensembl
6.8 years ago by macmath ▴ 170
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Answer: A: Is There A Webpage Or Server That Contains Data On Mouse Mitchondrial Genes Wit
6.8 years ago by macmath ▴ 170
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2
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1.8k
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Comment: C: Advice for RNAseq timepoint analysis
6.8 years ago by macmath ▴ 170
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1
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1.8k
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Comment: C: Advice for RNAseq timepoint analysis
6.8 years ago by macmath ▴ 170
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7
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1.8k
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Advice for RNAseq timepoint analysis
rna-seq
updated 6.8 years ago by ★ 1.4k • written 6.8 years ago by ▴ 170
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1
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9.1k
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Comment: C: How to collapseReplicate in DESeq2
6.8 years ago by macmath ▴ 170
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9.1k
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Comment: C: How to collapseReplicate in DESeq2
6.8 years ago by macmath ▴ 170
14
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6
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9.1k
views
How to collapseReplicate in DESeq2
RNA-Seq
6.8 years ago by macmath ▴ 170
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0
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2.2k
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Comment: C: Advice needed on RNAseq technical and biological replicates analysis using DEseq
6.8 years ago by macmath ▴ 170
1
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2
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2.2k
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Advice needed on RNAseq technical and biological replicates analysis using DEseq2
RNA-Seq DESeq2 next-gen
updated 6.8 years ago by ▴ 330 • written 6.8 years ago by ▴ 170
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2.4k
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Comment: C: How and what are the steps for performing RNAseq Time point analysis 3 biologica
6.8 years ago by macmath ▴ 170
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0
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2.4k
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Comment: C: How and what are the steps for performing RNAseq Time point analysis 3 biologica
6.8 years ago by macmath ▴ 170
4
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9
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2.4k
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How and what are the steps for performing RNAseq Time point analysis 3 biological replicates and 4 Technical replicates for each
RNA-Seq Time point
updated 6.8 years ago by 54k • written 6.8 years ago by ▴ 170
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2
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2.4k
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Comment: A: How and what are the steps for performing RNAseq Time point analysis 3 biologica
6.8 years ago by macmath ▴ 170
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1
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55k
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Comment: C: I would like to add gene names to a volcano plot obtained from DEseq2
7.0 years ago by macmath ▴ 170
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0
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16k
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Answer: A: Which Chip Seq Peak Callers Do You Use?
7.1 years ago by macmath ▴ 170
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5.5k
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Answer: Answer: How to get mouse-human homologues table from UCSC?
updated 16 months ago by 43k • written 7.3 years ago by ▴ 170
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0
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1.8k
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Query processing Illumina Expression Microarray
microarray workflow llumina
7.3 years ago by macmath ▴ 170
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0
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1.6k
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How to analyse Nano-ChIP-Seq data
ChIP-Seq nano-ChIP-seq
updated 20 months ago by 43k • written 8.4 years ago by ▴ 170
0
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0
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1.5k
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Comment: C: Remove batch effect between MoGene-1_1-st and Mouse430_2 Affymetrix
8.5 years ago by macmath ▴ 170
0
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4
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1.5k
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Remove batch effect between MoGene-1_1-st and Mouse430_2 Affymetrix
affymetrix batch-effect R Microarray
updated 20 months ago by 43k • written 8.5 years ago by ▴ 170
1
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0
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3.5k
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Answer: Answer: Please share the best tool for de novo motif discovery in large dataset
updated 22 months ago by 43k • written 9.1 years ago by ▴ 170
1
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0
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70k
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Answer: A: Converting Affymetrix Probes To Gene Ids
9.2 years ago by macmath ▴ 170
0
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1
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2.3k
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Comment: Comment: Which method could be used for cross normailizing microarray samples from differ
updated 2.0 years ago by 43k • written 9.2 years ago by ▴ 170
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2.3k
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Comment: Comment: Which method could be used for cross normailizing microarray samples from differ
updated 2.0 years ago by 43k • written 9.2 years ago by ▴ 170
1
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4
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2.3k
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Which method could be used for cross normailizing microarray samples from different platforms namely (Affmetrix, Agilent,Illumina..) ?
microarray normalization
updated 2.0 years ago by 43k • written 9.2 years ago by ▴ 170
9
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2
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5.5k
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How to create Correlation plots between wig files
ChIP-Seq RNA-Seq wig
updated 2.3 years ago by 43k • written 9.6 years ago by ▴ 170
0
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0
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2.4k
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Answer: A: Obtaining Downstream Non-Coding Sequences For A Gene From Ucsc Or Ensembl
11.1 years ago by macmath ▴ 170
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0
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3.3k
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Answer: Answer: Mapped Reads Into A Gene Level Count
updated 19 months ago by 43k • written 11.1 years ago by ▴ 170
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0
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3.6k
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Answer: A: How To Set Rapd Data For Analysis In Excel?
11.1 years ago by macmath ▴ 170
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0
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24k
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Answer: A: Extracting Columns From Csv File And Puting It In An Perl Array Data Type.
11.2 years ago by macmath ▴ 170
8
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10
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2.1k
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Substitute The File From Respective Definitions In Tab Separated File
awk
updated 11.3 years ago by 49k • written 11.3 years ago by ▴ 170
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0
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2.3k
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Comment: C: Replace Nexus File Gene Names By Another Defintion Using Grep Awk Sed
11.3 years ago by macmath ▴ 170
0
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0
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2.3k
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Comment: C: Replace Nexus File Gene Names By Another Defintion Using Grep Awk Sed
11.3 years ago by macmath ▴ 170
0
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1
reply
2.3k
views
Comment: C: Replace Nexus File Gene Names By Another Defintion Using Grep Awk Sed
11.3 years ago by macmath ▴ 170
4
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8
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2.3k
views
Replace Nexus File Gene Names By Another Defintion Using Grep Awk Sed
awk
updated 11.3 years ago by 161k • written 11.3 years ago by ▴ 170
0
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1
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2.3k
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Comment: C: Replace Nexus File Gene Names By Another Defintion Using Grep Awk Sed
11.3 years ago by macmath ▴ 170
0
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2
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2.1k
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Comment: C: Substitute The File From Respective Definitions In Tab Separated File
11.3 years ago by macmath ▴ 170
11
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8
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3.6k
views
Extract Common Line Out Of Multiple Files
awk comparison
updated 11.3 years ago by 12k • written 11.3 years ago by ▴ 170
0
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0
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3.6k
views
Comment: C: Extract Common Line Out Of Multiple Files
11.3 years ago by macmath ▴ 170
57 results • Page 1 of 2
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