User: tunl

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tunl40
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Posts by tunl

<prev • 67 results • page 2 of 7 • next >
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Comment: C: Question about downloading RNA-seq long reads and short reads for the same sampl
... [DELETED, sorry I initially replied at a wrong place] ...
written 10 weeks ago by tunl40
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Comment: C: Question about downloading RNA-seq long reads and short reads for the same sampl
... This is great. Thanks a lot! I’ll take a look at them. ...
written 10 weeks ago by tunl40
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Comment: C: Question about downloading RNA-seq long reads and short reads for the same sampl
... Thank you so much for providing me the GSM datasets links! I really appreciate it. I looked into these datasets, but this paper only gave us the processed data (aligned reads for Illumina; error-corrected reads for PacBio). ...
written 10 weeks ago by tunl40
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Comment: C: Question about downloading RNA-seq long reads and short reads for the same sampl
... Thank you so much! This PacBio site looks great. I'll take a look. ...
written 10 weeks ago by tunl40
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Comment: C: Question about downloading RNA-seq long reads and short reads for the same sampl
... Thank you so much for your suggestion! I looked at this posting, but the paper they mentioned there does not provide their long reads and short reads datasets for downloading. This seems to be the situation in many papers: they do not provide their datasets of long reads and short reads. So I was wo ...
written 10 weeks ago by tunl40
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Question about downloading RNA-seq long reads and short reads for the same sample
... We need to use RNA-seq long reads and short reads from the same sample to do some comparisons. I was wondering which websites may have both RNA-seq long reads (e.g. PacBio reads) and short reads for the same sample so we could download from there? Any advice would be greatly appreciated. Thank you ...
long reads rna-seq pacbio written 10 weeks ago by tunl40 • updated 10 weeks ago by magdoll10
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Comment: C: Question about some features in Cytoscape.js (or D3.js)
... Thanks a lot! So Cytoscape.js is easier to program with than D3.js right? If I go with Cytoscape.js by sacrificing some features, how hard would it be for me to pick up Javascript and work with Cytoscape.js? Thanks again! ...
written 9 months ago by tunl40
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Comment: C: Question about some features in Cytoscape.js (or D3.js)
... Thank you so much for your advice! Actually, what I mean about “we need to show the network in layers” is that we have 3 different types of nodes, we want to put each type of nodes at different locations (bottom, middle, and top) of the window, but there are edges between different types of nodes. ...
written 9 months ago by tunl40
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Comment: C: Question about some features in Cytoscape.js (or D3.js)
... Thank you a lot for your advice! I’m a java programmer, but I never used javascript before. Could you please give me some ideas about how hard (and how long) it would be to pick up javascript for someone who can program in java? So if Cytoscape.js can support these features, does it mean Cytoscape ...
written 9 months ago by tunl40
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Comment: C: Question about some features in Cytoscape.js (or D3.js)
... Thank you so much for your advice! We'd need to put this on a website. And the number of nodes could be a lot and is up to the user's input. We will set these features by default through programming, but users can change other settings manually if they want. So I guess we'd need it to be interacti ...
written 9 months ago by tunl40

Latest awards to tunl

Popular Question 8 months ago, created a question with more than 1,000 views. For Coverage-search vs. no coverage-search in running Tophat
Supporter 16 months ago, voted at least 25 times.

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