- New User
- Last seen:
- 1 year, 4 months ago
- 2 years, 6 months ago
- Scholar ID:
Posts by Purpleone
... I'm looking for a tool/webserver/galaxy-workflow that can do the following steps: 1) Take a bunch of SNPs in the form of RS IDs 2) Map the SNPs to nearby genes, based on some tunable criteria (distance) 3) Perform GSEA on these genes to find enriched pathways/sets It would be extra nice if this ...
... What is a standard approach to estimating the (phenotypic) variance explained by SNPs in a case/control GWAS? I know about GCTA, but it's very computationally intensive. Are there simpler methods? ...
... I've got about 2M imputed SNPs and 35K gene expression probesets, and I'd like to identify all eQTL. Running this under PLINK --linear is going to take a very long time, are there any specialized tools out there to handle this sort of data? ...
Latest awards to Purpleone
No awards yet. Soon to come :-)
Powered by Biostar version 2.0.0
Traffic: 379 users visited in the last hour