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Comment: C: Quantile normalisation: raw rpkm or log2rpkm?
updated 5.2 years ago by 43k • written 7.5 years ago by ★ 1.7k
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1
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1.4k
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Comment: C: Can i use ucsc track browser without a reference organism?
5.6 years ago by BioinfGuru ★ 1.7k
1
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1
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1.4k
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Comment: C: Can i use ucsc track browser without a reference organism?
5.6 years ago by BioinfGuru ★ 1.7k
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0
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6.9k
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Comment: C: mitochondrial blacklists ATAC-Seq
updated 5.6 years ago by 43k • written 7.1 years ago by ★ 1.7k
1
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1
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6.9k
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Answer: A: mitochondrial blacklists ATAC-Seq
updated 5.6 years ago by 43k • written 7.1 years ago by ★ 1.7k
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1
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4.7k
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Comment: C: Confused about merging RNA-seq lanes/runs
5.8 years ago by BioinfGuru ★ 1.7k
8
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3
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4.7k
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Confused about merging RNA-seq lanes/runs
Merge RNA-seq samples runs lanes
updated 5.8 years ago by 141k • written 5.8 years ago by ★ 1.7k
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2
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4.7k
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Comment: C: Can we concatenate two fastq files from same sample but different runs
5.8 years ago by BioinfGuru ★ 1.7k
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0
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6.6k
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Answer: C: Picard MarkDuplicates flag vs remove issue
5.9 years ago by BioinfGuru ★ 1.7k
0
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1
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6.6k
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Comment: C: Picard MarkDuplicates flag vs remove issue
5.9 years ago by BioinfGuru ★ 1.7k
1
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0
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1.9k
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Comment: C: Is the sequence quality good enough?
5.9 years ago by BioinfGuru ★ 1.7k
9
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7
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1.9k
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Is the sequence quality good enough?
WGS HISEQ4000 QC
5.9 years ago by BioinfGuru ★ 1.7k
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0
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1.9k
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Comment: C: Is the sequence quality good enough?
5.9 years ago by BioinfGuru ★ 1.7k
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0
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1.9k
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Comment: C: Is the sequence quality good enough?
5.9 years ago by BioinfGuru ★ 1.7k
1
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0
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2.1k
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Comment: C: Low mapping percentage after mapping RNA-seq reads to a closely related species
5.9 years ago by BioinfGuru ★ 1.7k
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0
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1.6k
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Variant analysis on 1 or 2 samples: are the final steps of the GATK pipeline unneccessary?
SNP GATK pipeline variant analysis
5.9 years ago by BioinfGuru ★ 1.7k
0
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0
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2.4k
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Comment: C: HaplotypeCaller output - All records are non-variant - Have I gone wrong somwher
5.9 years ago by BioinfGuru ★ 1.7k
2
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2
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2.4k
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HaplotypeCaller output - All records are non-variant - Have I gone wrong somewhere?
SNP haplotypecaller NON_REF gatk
5.9 years ago by BioinfGuru ★ 1.7k
2
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1
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12k
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Comment: C: How to select an aligner?
5.9 years ago by BioinfGuru ★ 1.7k
4
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1
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12k
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Answer: A: How to select an aligner?
5.9 years ago by BioinfGuru ★ 1.7k
0
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1
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3.0k
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Comment: C: Parsing Blast output on linux/unix
5.9 years ago by BioinfGuru ★ 1.7k
0
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0
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2.8k
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Comment: C: GATK SNPs calling multiple sample without any known SNPs database
5.9 years ago by BioinfGuru ★ 1.7k
0
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1
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2.8k
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Answer: A: GATK SNPs calling multiple sample without any known SNPs database
5.9 years ago by BioinfGuru ★ 1.7k
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0
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1.5k
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Answer: A: Are there needs to perform imputation for genotype generated from WGS ?
5.9 years ago by BioinfGuru ★ 1.7k
1
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0
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1.4k
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Answer: A: Protein Prediction Software - Any Recommendations? (template based vs non-templa
5.9 years ago by BioinfGuru ★ 1.7k
1
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0
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2.8k
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Answer: A: removing batch effects from large number of data sets
5.9 years ago by BioinfGuru ★ 1.7k
2
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1
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1.9k
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Comment: C: location of mutations
5.9 years ago by BioinfGuru ★ 1.7k
1
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1
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1.9k
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Answer: A: location of mutations
5.9 years ago by BioinfGuru ★ 1.7k
0
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1
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9.6k
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Comment: C: STAR output - high multi-mapping, low alignment (human)
5.9 years ago by BioinfGuru ★ 1.7k
3
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1
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9.6k
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Answer: A: STAR output - high multi-mapping, low alignment (human)
5.9 years ago by BioinfGuru ★ 1.7k
1
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0
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2.0k
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Answer: A: How to assess extent of cell-type admixtures from bulk RNA-seq data for a single
5.9 years ago by BioinfGuru ★ 1.7k
1
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2
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5.5k
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Answer: A: How to run bcftools roh with multiple samples vcf
5.9 years ago by BioinfGuru ★ 1.7k
0
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2
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6.4k
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Answer: A: MACS2 output (fold enrichment)
5.9 years ago by BioinfGuru ★ 1.7k
0
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3
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1.0k
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Answer: C: perl script 'blast_rod_finder.pl' not giving output but no errors either
5.9 years ago by BioinfGuru ★ 1.7k
0
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1
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4.3k
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Comment: A: Can someone please help me run any GATK4 pipeline?
5.9 years ago by BioinfGuru ★ 1.7k
3
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1
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11k
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Answer: A: LEADING and TRAILING in TRIMMOMATIC
5.9 years ago by BioinfGuru ★ 1.7k
1
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1
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8.5k
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Answer: A: GATK HaolotypeCaller takes too much time for variant calling
5.9 years ago by BioinfGuru ★ 1.7k
4
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12
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2.2k
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Variant calling on single sample Macaque WGS data - advice please
Variant calling mutect2 haplotypecaller PON
5.9 years ago by BioinfGuru ★ 1.7k
0
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0
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2.2k
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Comment: C: Variant calling on single sample Macaque WGS data - advice please
5.9 years ago by BioinfGuru ★ 1.7k
0
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0
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2.2k
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Comment: C: Variant calling on single sample Macaque WGS data - advice please
5.9 years ago by BioinfGuru ★ 1.7k
0
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2
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2.2k
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Comment: C: Variant calling on single sample Macaque WGS data - advice please
5.9 years ago by BioinfGuru ★ 1.7k
0
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1
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2.2k
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Comment: C: Variant calling on single sample Macaque WGS data - advice please
5.9 years ago by BioinfGuru ★ 1.7k
0
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1
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3.9k
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Comment: C: Extracting upstream and Downstream of a Gene based on different intervals
5.9 years ago by BioinfGuru ★ 1.7k
0
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1
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2.3k
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Comment: C: Why does inclusion of decoy sequences cause more BWA alignments to an autosome?
5.9 years ago by BioinfGuru ★ 1.7k
0
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0
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3.2k
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Answer: A: How to edit count matrix of a DESeq object?
5.9 years ago by BioinfGuru ★ 1.7k
0
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0
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5.3k
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Comment: C: Swiss-Model vs. Modeller
5.9 years ago by BioinfGuru ★ 1.7k
2
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1
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1.6k
views
Answer: A: A dataset containing small RNA-seq experiments over different tissues of human.
5.9 years ago by BioinfGuru ★ 1.7k
1
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1
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1.2k
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Comment: C: Same code for different versions of the same platform
6.0 years ago by BioinfGuru ★ 1.7k
0
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0
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14k
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Comment: C: download from SRA
6.0 years ago by BioinfGuru ★ 1.7k
0
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1
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2.2k
views
Comment: C: There any tools for gene regulation network visualizing?
6.1 years ago by BioinfGuru ★ 1.7k
412 results • Page 2 of 9
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