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Comment:
C: Correlation heatmaps: use correlation as clustering distance or not?
3.1 years ago by
JJ
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3.6k
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Comment:
C: Tuning of the HISAT2 parameters --mp and --sp
3.1 years ago by
JJ
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1.2k
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Comment:
C: Handling Microarray datasets from different experiments for DEG analysis
4.2 years ago by
JJ
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Comment:
C: Estimation of RNA-seq protocol from bam files
4.2 years ago by
JJ
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926
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Comment:
C: Estimation of RNA-seq protocol from bam files
4.2 years ago by
JJ
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Comment:
C: Confusing RNA-seq Alignment Stats (HISAT2 & Qualimap)
4.5 years ago by
JJ
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Comment:
C: Confusing RNA-seq Alignment Stats (HISAT2 & Qualimap)
4.5 years ago by
JJ
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Comment:
C: Confusing RNA-seq Alignment Stats (HISAT2 & Qualimap)
4.5 years ago by
JJ
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3.7k
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Comment:
C: TCGA CNV data - immensely different results depending on data source
4.7 years ago by
JJ
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1.3k
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Comment:
C: Pathway analysis with co-variates for RNA-seq data
5.1 years ago by
JJ
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1.3k
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Comment:
C: Pathway analysis with co-variates for RNA-seq data
5.1 years ago by
JJ
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3.5k
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Comment:
C: SRA and the relationship between biosamples, experiments and runs
5.2 years ago by
JJ
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3.5k
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Comment:
C: SRA and the relationship between biosamples, experiments and runs
5.2 years ago by
JJ
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21k
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Comment:
C: Calculation of VAF (variant allele frequency)
5.2 years ago by
JJ
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2.3k
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Comment:
C: Error using Tabix
5.2 years ago by
JJ
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3.7k
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Comment:
C: VCF file (annotated with snpeff) to MAF
5.2 years ago by
JJ
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1.0k
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Comment:
C: Genome and transcriptome analyses in yeast
5.5 years ago by
JJ
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7.1k
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Comment:
C: Compute Phylogenetic Trees Using Snps Data (VCF files)
5.5 years ago by
JJ
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2.5k
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Comment:
C: How many Mio reads are recommended for RNA-sequencing experiments in yeast?
5.5 years ago by
JJ
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Comment:
C: How to evaluate a biomarker signature in an independent dataset
5.7 years ago by
JJ
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2.0k
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Comment:
C: How to evaluate a biomarker signature in an independent dataset
5.7 years ago by
JJ
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2.0k
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Comment:
C: How to evaluate a biomarker signature in an independent dataset
5.7 years ago by
JJ
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1.8k
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Comment:
C: Tools for Biomarker Signature Generation
5.7 years ago by
JJ
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1.8k
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Comment:
C: Tools for Biomarker Signature Generation
5.7 years ago by
JJ
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1
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8.1k
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Comment:
C: Resources for gene signature creation
5.7 years ago by
JJ
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8.1k
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Comment:
C: Resources for gene signature creation
5.7 years ago by
JJ
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8.1k
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Comment:
C: Resources for gene signature creation
5.7 years ago by
JJ
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2.8k
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Comment:
C: Confusion regarding generating phylogenetic tree from snp data
5.8 years ago by
JJ
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7.1k
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Comment:
C: Compute Phylogenetic Trees Using Snps Data (VCF files)
5.8 years ago by
JJ
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1
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7.1k
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Comment:
C: Compute Phylogenetic Trees Using Snps Data (VCF files)
5.8 years ago by
JJ
▴ 670
0
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1
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7.1k
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Comment:
C: Compute Phylogenetic Trees Using Snps Data (VCF files)
5.8 years ago by
JJ
▴ 670
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0
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7.1k
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Comment:
C: Compute Phylogenetic Trees Using Snps Data (VCF files)
5.8 years ago by
JJ
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1.7k
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Comment:
C: How can I compute if the co-occurrence of two TFBSs within a certain width in al
5.9 years ago by
JJ
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votes
0
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1.7k
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Comment:
C: How can I compute if the co-occurrence of two TFBSs within a certain width in al
5.9 years ago by
JJ
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1.9k
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Comment:
C: Calculate if the co-occurring of two TFBSs is higher than one would expect by ch
6.0 years ago by
JJ
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0
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1.9k
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Comment:
C: Calculate if the co-occurring of two TFBSs is higher than one would expect by ch
6.0 years ago by
JJ
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1.9k
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Comment:
C: Calculate if the co-occurring of two TFBSs is higher than one would expect by ch
6.0 years ago by
JJ
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1
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1.9k
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Comment:
C: Calculate if the co-occurring of two TFBSs is higher than one would expect by ch
6.0 years ago by
JJ
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3
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1.9k
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Comment:
C: Calculate if the co-occurring of two TFBSs is higher than one would expect by ch
6.0 years ago by
JJ
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1
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1.8k
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Comment:
C: Are maps of regulatory regions available for hg38?
6.0 years ago by
JJ
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1
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1.8k
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Comment:
C: Are maps of regulatory regions available for hg38?
6.0 years ago by
JJ
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1
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0
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2.9k
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Comment:
C: Convert binding site formats from different databases and compare the motifs - a
6.0 years ago by
JJ
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0
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2.9k
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Comment:
C: Scanning for TFBSs of known motifs in all human promoters
6.0 years ago by
JJ
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0
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1
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1.3k
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Comment:
C: Need publicly available raw RNA-seq data generated by human cell lines
6.0 years ago by
JJ
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1.3k
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Comment:
C: How should a query a gene type in multiple genomes?
6.0 years ago by
JJ
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1
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2.9k
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Comment:
C: Scanning for TFBSs of known motifs in all human promoters
6.0 years ago by
JJ
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0
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2.9k
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Comment:
C: Scanning for TFBSs of known motifs in all human promoters
6.0 years ago by
JJ
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0
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2.0k
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Comment:
C: Gene Expression data and variants from the same fastqc raw file
6.0 years ago by
JJ
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0
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3.5k
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Comment:
C: What are the requirements to use data generated in other microarray experiments
6.0 years ago by
JJ
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0
replies
3.8k
views
Comment:
C: Deseq2 batch effect design issue
6.0 years ago by
JJ
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