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5
votes
19
replies
3.9k
views
8 follow
Hisat2 aligner problem
RNA-Seq
ChIP-Seq
alignment
Assembly
software error
updated 3 months ago by
ATpoint
81k • written 4.8 years ago by
ta_awwad
▴ 340
0
votes
0
replies
443
views
Comment:
Comment: Exon skipping AS pipeline
17 months ago by
ta_awwad
▴ 340
1
vote
2
replies
443
views
Exon skipping AS pipeline
splicing
RNA-Seq
Alternative
17 months ago by
ta_awwad
▴ 340
0
votes
1
reply
546
views
DEXseq batch effect removal error
RNA-Seq
DEXseq
R
DEseq2
updated 17 months ago by
jv
★ 1.7k • written 17 months ago by
ta_awwad
▴ 340
0
votes
1
reply
1.3k
views
Comment:
Comment: DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"C
19 months ago by
ta_awwad
▴ 340
0
votes
0
replies
1.3k
views
Comment:
Comment: DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"C
19 months ago by
ta_awwad
▴ 340
0
votes
0
replies
1.3k
views
Comment:
Comment: DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"C
19 months ago by
ta_awwad
▴ 340
1
vote
5
replies
1.3k
views
DEXSeq unable to find an inherited method for function ‘NSBS’ for signature ‘"CompressedIntegerList"’
DEXSeq
R
Bioconductor
updated 16 months ago by
barrypraveen
▴ 130 • written 19 months ago by
ta_awwad
▴ 340
0
votes
0
replies
3.6k
views
Answer:
Answer: How to select differential expressed genes using DeSeq2?
24 months ago by
ta_awwad
▴ 340
0
votes
0
replies
575
views
Comment:
Comment: find peaks over a set of genes
2.1 years ago by
ta_awwad
▴ 340
2
votes
2
replies
575
views
find peaks over a set of genes
ChIP-seq
R
RNA-Seq
2.1 years ago by
ta_awwad
▴ 340
0
votes
0
replies
415
views
Sankey plot for bulk RNA-seq
DEseq2
RNA-Seq
R
2.4 years ago by
ta_awwad
▴ 340
0
votes
0
replies
1.5k
views
Comment:
C: Motif match chip-seq peaks
4.1 years ago by
ta_awwad
▴ 340
0
votes
1
reply
1.5k
views
Comment:
C: Motif match chip-seq peaks
4.1 years ago by
ta_awwad
▴ 340
0
votes
1
reply
1.5k
views
Comment:
C: Motif match chip-seq peaks
4.1 years ago by
ta_awwad
▴ 340
0
votes
1
reply
1.5k
views
Comment:
C: Motif match chip-seq peaks
4.1 years ago by
ta_awwad
▴ 340
0
votes
1
reply
1.5k
views
Comment:
C: Motif match chip-seq peaks
4.1 years ago by
ta_awwad
▴ 340
0
votes
1
reply
1.5k
views
Comment:
C: Motif match chip-seq peaks
4.1 years ago by
ta_awwad
▴ 340
0
votes
1
reply
1.5k
views
Comment:
C: Motif match chip-seq peaks
4.1 years ago by
ta_awwad
▴ 340
6
votes
16
replies
1.5k
views
Motif match chip-seq peaks
ChIP-Seq
sequencing
updated 4.1 years ago by
ATpoint
81k • written 4.1 years ago by
ta_awwad
▴ 340
0
votes
0
replies
1.5k
views
Comment:
C: Motif match chip-seq peaks
4.1 years ago by
ta_awwad
▴ 340
1
vote
1
reply
684
views
how to get RNA-binding proteins in mouse
RNA-Seq
ChIP-Seq
CLIP-seq
proteomics
4.2 years ago by
ta_awwad
▴ 340
14
votes
12
replies
5.3k
views
ATAC-seq 150bp reads
next-gen
ATAC-seq
ChIP-Seq
sequencing
updated 4.2 years ago by
igor
13k • written 4.2 years ago by
ta_awwad
▴ 340
0
votes
0
replies
5.3k
views
Comment:
C: ATAC-seq 150bp reads
4.2 years ago by
ta_awwad
▴ 340
0
votes
1
reply
5.3k
views
Comment:
C: ATAC-seq 150bp reads
4.2 years ago by
ta_awwad
▴ 340
0
votes
0
replies
5.3k
views
Comment:
C: ATAC-seq 150bp reads
4.2 years ago by
ta_awwad
▴ 340
0
votes
1
reply
5.3k
views
Comment:
C: ATAC-seq 150bp reads
4.2 years ago by
ta_awwad
▴ 340
0
votes
0
replies
8.6k
views
Comment:
C: Tools For Analysis Allele Specific Expression In Rna-Seq Data?
4.3 years ago by
ta_awwad
▴ 340
0
votes
0
replies
4.3k
views
Comment:
C: Allele Specific Expression Analysis
4.3 years ago by
ta_awwad
▴ 340
0
votes
1
reply
8.6k
views
Comment:
C: Tools For Analysis Allele Specific Expression In Rna-Seq Data?
4.3 years ago by
ta_awwad
▴ 340
0
votes
1
reply
4.3k
views
Comment:
A: Allele Specific Expression Analysis
4.3 years ago by
ta_awwad
▴ 340
0
votes
0
replies
3.9k
views
Comment:
C: Hisat2 aligner problem
4.7 years ago by
ta_awwad
▴ 340
0
votes
1
reply
3.9k
views
Comment:
C: Hisat2 aligner problem
4.8 years ago by
ta_awwad
▴ 340
0
votes
1
reply
3.9k
views
Comment:
C: Hisat2 aligner problem
4.8 years ago by
ta_awwad
▴ 340
0
votes
0
replies
3.9k
views
Comment:
C: Hisat2 aligner problem
4.8 years ago by
ta_awwad
▴ 340
0
votes
1
reply
3.9k
views
Comment:
C: Hisat2 aligner problem
4.8 years ago by
ta_awwad
▴ 340
0
votes
1
reply
3.9k
views
Comment:
C: Hisat2 aligner problem
4.8 years ago by
ta_awwad
▴ 340
0
votes
1
reply
3.9k
views
Comment:
C: Hisat2 aligner problem
4.8 years ago by
ta_awwad
▴ 340
0
votes
0
replies
1.2k
views
Comment:
C: 4Cseqpipe for long-range interaction
5.1 years ago by
ta_awwad
▴ 340
0
votes
2
replies
1.2k
views
4Cseqpipe for long-range interaction
R
chromosome conformation captur
Assembly
genome
5.1 years ago by
ta_awwad
▴ 340
0
votes
0
replies
2.7k
views
Comment:
C: Filter Fastq file by seq
5.1 years ago by
ta_awwad
▴ 340
0
votes
1
reply
2.7k
views
Comment:
C: Filter Fastq file by seq
5.1 years ago by
ta_awwad
▴ 340
9
votes
5
replies
2.7k
views
Filter Fastq file by seq
NGS
Python
R
Bioconductor
5.1 years ago by
ta_awwad
▴ 340
0
votes
0
replies
1.6k
views
Comment:
C: RIblast output Circos plot
5.2 years ago by
ta_awwad
▴ 340
1
vote
2
replies
1.6k
views
Comment:
C: RIblast output Circos plot
5.2 years ago by
ta_awwad
▴ 340
3
votes
7
replies
1.6k
views
RIblast output Circos plot
R
RIblast
circos
updated 5.2 years ago by
Gautier Richard
▴ 370 • written 5.2 years ago by
ta_awwad
▴ 340
0
votes
0
replies
1.6k
views
Comment:
C: RIblast output Circos plot
5.2 years ago by
ta_awwad
▴ 340
2
votes
0
replies
5.8k
views
Answer:
A: Convert bed12 to GFF
5.6 years ago by
ta_awwad
▴ 340
4
votes
3
replies
1.2k
views
where to find hg38 CDS without UTRs
RNA-Seq
genome
assembly
alignment
updated 5.7 years ago by
GenoMax
140k • written 5.7 years ago by
ta_awwad
▴ 340
8
votes
12
replies
1.8k
views
can lnc-RNA target coding RNA?
RNA
lnc-RNA
mRNA
updated 5.7 years ago by
EagleEye
7.5k • written 5.8 years ago by
ta_awwad
▴ 340
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