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378
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Longest Protein per Gene from gpff file
Protein gpff
updated 4 weeks ago by 15k • written 4 weeks ago by ▴ 300
0
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1
reply
454
views
Protein secuence extraction from gpff file for a genes list
Protein gpff
updated 4 months ago by 13k • written 4 months ago by ▴ 300
0
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2
replies
620
views
number of SNPs per sample in multi-sample VCF file
VCF bcftools
updated 6 months ago by ★ 3.0k • written 6 months ago by ▴ 300
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1
reply
648
views
Integration of paired and single-end SRA
Paired-end Single-end VCF Resequencing
updated 9 months ago by 20k • written 9 months ago by ▴ 300
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0
replies
864
views
Comment: Comment: merge overlaps and remove non overlap genomic windows
13 months ago by reza ▴ 300
0
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1
reply
864
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Comment: Comment: merge overlaps and remove non overlap genomic windows
13 months ago by reza ▴ 300
0
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4
replies
864
views
merge overlaps and remove non overlap genomic windows
BED intersection overlap
13 months ago by reza ▴ 300
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0
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1.1k
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Comment: Comment: VCF conservation into Treemix
17 months ago by reza ▴ 300
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0
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2.4k
views
Comment: Comment: BWA Index Referencing Failed. Possible Reason and Solutions?
17 months ago by reza ▴ 300
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0
replies
685
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bootstraped treemix show no migration event
Treemix Bootstrap
18 months ago by reza ▴ 300
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2
replies
1.1k
views
VCF conservation into Treemix
Treemix Plink VCF
17 months ago by reza ▴ 300
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0
replies
1.3k
views
Comment: Comment: how to filter a multi-sample VCF file based on 0/0 genotype numbers
22 months ago by reza ▴ 300
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1
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1.3k
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Comment: Comment: how to filter a multi-sample VCF file based on 0/0 genotype numbers
22 months ago by reza ▴ 300
2
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4
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1.3k
views
how to filter a multi-sample VCF file based on 0/0 genotype numbers
genotype VCF CNV
22 months ago by reza ▴ 300
0
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2
replies
1.6k
views
pooled-heterozygosity calculation
VCF Population-Genetics WGS Selective-sweep
updated 2.0 years ago by • 0 • written 3.6 years ago by ▴ 300
0
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1
reply
1.1k
views
Prolem with Dsuite program for introgression test
Introgression Dsuite
updated 2.5 years ago by • 0 • written 2.8 years ago by ▴ 300
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0
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562
views
How to determine a threshold for fdm parameter to identify introgressed regions on genome
WGS Introgression Dsuite
2.8 years ago by reza ▴ 300
0
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1
reply
1.2k
views
ERROR: Variant physical position must be monotonically increasing
XPEHH selscan
updated 3.5 years ago by 4.7k • written 3.5 years ago by ▴ 300
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0
replies
880
views
different windows and snps for same vcf file while i calculate genetic diversity using vcftools
vcftools pi
3.5 years ago by reza ▴ 300
0
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0
replies
527
views
Pooled-heterozigosity (SECTION2)
Hp VCF Pooled_Heterozygosity
3.6 years ago by reza ▴ 300
0
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0
replies
1.8k
views
Comment: Comment: Annotation of vcftools fst output using GTF or GFF
3.6 years ago by reza ▴ 300
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1
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1.8k
views
Comment: Comment: Annotation of vcftools fst output using GTF or GFF
3.6 years ago by reza ▴ 300
2
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4
replies
1.8k
views
Annotation of vcftools fst output using GTF or GFF
fst vcftools annotation GTF
3.6 years ago by reza ▴ 300
1
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1
reply
4.0k
views
Comment: Comment: Bam file depth of coverage and statstics
3.6 years ago by reza ▴ 300
0
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1
reply
4.0k
views
Comment: Comment: Bam file depth of coverage and statstics
3.6 years ago by reza ▴ 300
0
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0
replies
4.9k
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Comment: Comment: GATK-Allele frequency
3.6 years ago by reza ▴ 300
0
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1
reply
4.0k
views
Comment: Comment: Bam file depth of coverage and statstics
3.6 years ago by reza ▴ 300
1
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1
reply
2.6k
views
Comment: Comment: ABBA BABA test for two population
3.6 years ago by reza ▴ 300
1
vote
4
replies
2.6k
views
ABBA BABA test for two population
introgression genetics Population ABAB-BABA
updated 3.6 years ago by ▴ 130 • written 3.7 years ago by ▴ 300
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0
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1.6k
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Comment: Comment: How to filter GATK vcf file using other programs
3.8 years ago by reza ▴ 300
0
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1
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1.6k
views
Comment: Comment: How to filter GATK vcf file using other programs
3.8 years ago by reza ▴ 300
0
votes
4
replies
1.6k
views
How to filter GATK vcf file using other programs
VCF Filtration GATK
3.8 years ago by reza ▴ 300
1
vote
1
reply
1.7k
views
Adding read groups to mark duplicated bam file
Picard GATK
updated 3.8 years ago by ★ 1.2k • written 3.8 years ago by ▴ 300
0
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0
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2.4k
views
Comment: Comment: how to removed the first two nucleotides from a fastq file (single-end)
4.0 years ago by reza ▴ 300
1
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0
replies
2.0k
views
Comment: Comment: Problem with limma in microarray analysis
4.1 years ago by reza ▴ 300
0
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1
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2.0k
views
Comment: Comment: Problem with limma in microarray analysis
4.1 years ago by reza ▴ 300
0
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1
reply
2.0k
views
Comment: Comment: Problem with limma in microarray analysis
4.1 years ago by reza ▴ 300
5
votes
6
replies
2.0k
views
Problem with limma in microarray analysis
limma microarray R
4.1 years ago by reza ▴ 300
1
vote
7
replies
15k
views
A problem with download SRA using SRA toolkit
SRAtoolkit NCBI SRA
updated 24 months ago by 45k • written 5.3 years ago by ▴ 300
0
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1
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2.5k
views
Comment: Comment: big loss after markduplication
4.2 years ago by reza ▴ 300
0
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0
replies
2.5k
views
Comment: Comment: big loss after markduplication
4.2 years ago by reza ▴ 300
0
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0
replies
2.5k
views
Comment: Comment: big loss after markduplication
4.2 years ago by reza ▴ 300
0
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1
reply
2.5k
views
Comment: Comment: big loss after markduplication
4.2 years ago by reza ▴ 300
0
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1
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2.5k
views
Comment: Comment: big loss after markduplication
4.2 years ago by reza ▴ 300
1
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10
replies
2.5k
views
big loss after markduplication
MarkDuplicates Re-sequencing Picard
updated 4.2 years ago by ▴ 170 • written 4.2 years ago by ▴ 300
1
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1
reply
962
views
variant calling using masked reference genome
Bowtie2 Reference Genome Variant Calling
4.3 years ago by reza ▴ 300
0
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1
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2.0k
views
Comment: C: error in running Combat function
4.4 years ago by reza ▴ 300
0
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1
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2.0k
views
Comment: C: error in running Combat function
4.4 years ago by reza ▴ 300
0
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1
reply
2.0k
views
Comment: C: error in running Combat function
4.4 years ago by reza ▴ 300
0
votes
6
replies
2.0k
views
error in running Combat function
R sva Combat R studio
4.4 years ago by reza ▴ 300
160 results • Page 1 of 4
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