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456
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Comment: Comment: VCF conservation into Treemix
3 months ago by reza ▴ 300
0
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0
replies
819
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Comment: Comment: BWA Index Referencing Failed. Possible Reason and Solutions?
3 months ago by reza ▴ 300
0
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0
replies
311
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bootstraped treemix show no migration event
Treemix Bootstrap
4 months ago by reza ▴ 300
0
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2
replies
456
views
VCF conservation into Treemix
Treemix Plink VCF
3 months ago by reza ▴ 300
0
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0
replies
820
views
Comment: Comment: how to filter a multi-sample VCF file based on 0/0 genotype numbers
8 months ago by reza ▴ 300
0
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1
reply
820
views
Comment: Comment: how to filter a multi-sample VCF file based on 0/0 genotype numbers
8 months ago by reza ▴ 300
2
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4
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820
views
how to filter a multi-sample VCF file based on 0/0 genotype numbers
genotype VCF CNV
8 months ago by reza ▴ 300
0
votes
2
replies
1.1k
views
pooled-heterozygosity calculation
VCF Population-Genetics WGS Selective-sweep
updated 10 months ago by • 0 • written 2.5 years ago by ▴ 300
0
votes
1
reply
742
views
Prolem with Dsuite program for introgression test
Introgression Dsuite
updated 16 months ago by • 0 • written 19 months ago by ▴ 300
0
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0
replies
367
views
How to determine a threshold for fdm parameter to identify introgressed regions on genome
WGS Introgression Dsuite
19 months ago by reza ▴ 300
0
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1
reply
798
views
ERROR: Variant physical position must be monotonically increasing
XPEHH selscan
updated 2.4 years ago by 4.2k • written 2.4 years ago by ▴ 300
0
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0
replies
595
views
different windows and snps for same vcf file while i calculate genetic diversity using vcftools
vcftools pi
2.4 years ago by reza ▴ 300
0
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0
replies
382
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Pooled-heterozigosity (SECTION2)
Hp VCF Pooled_Heterozygosity
2.4 years ago by reza ▴ 300
0
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0
replies
1.2k
views
Comment: Comment: Annotation of vcftools fst output using GTF or GFF
2.4 years ago by reza ▴ 300
0
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1
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1.2k
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Comment: Comment: Annotation of vcftools fst output using GTF or GFF
2.4 years ago by reza ▴ 300
2
votes
4
replies
1.2k
views
Annotation of vcftools fst output using GTF or GFF
fst vcftools annotation GTF
2.4 years ago by reza ▴ 300
1
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1
reply
2.8k
views
Comment: Comment: Bam file depth of coverage and statstics
2.5 years ago by reza ▴ 300
0
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1
reply
2.8k
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Comment: Comment: Bam file depth of coverage and statstics
2.5 years ago by reza ▴ 300
0
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0
replies
3.5k
views
Comment: Comment: GATK-Allele frequency
2.5 years ago by reza ▴ 300
0
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1
reply
2.8k
views
Comment: Comment: Bam file depth of coverage and statstics
2.5 years ago by reza ▴ 300
1
vote
1
reply
1.7k
views
Comment: Comment: ABBA BABA test for two population
2.5 years ago by reza ▴ 300
1
vote
4
replies
1.7k
views
ABBA BABA test for two population
introgression genetics Population ABAB-BABA
updated 2.5 years ago by ▴ 100 • written 2.5 years ago by ▴ 300
0
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0
replies
1.1k
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Comment: Comment: How to filter GATK vcf file using other programs
2.6 years ago by reza ▴ 300
0
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1
reply
1.1k
views
Comment: Comment: How to filter GATK vcf file using other programs
2.6 years ago by reza ▴ 300
0
votes
4
replies
1.1k
views
How to filter GATK vcf file using other programs
VCF Filtration GATK
2.6 years ago by reza ▴ 300
1
vote
1
reply
1.0k
views
Adding read groups to mark duplicated bam file
Picard GATK
updated 2.7 years ago by ★ 1.2k • written 2.7 years ago by ▴ 300
0
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0
replies
1.7k
views
Comment: Comment: how to removed the first two nucleotides from a fastq file (single-end)
2.9 years ago by reza ▴ 300
1
vote
0
replies
1.3k
views
Comment: Comment: Problem with limma in microarray analysis
2.9 years ago by reza ▴ 300
0
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1
reply
1.3k
views
Comment: Comment: Problem with limma in microarray analysis
2.9 years ago by reza ▴ 300
0
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1
reply
1.3k
views
Comment: Comment: Problem with limma in microarray analysis
2.9 years ago by reza ▴ 300
5
votes
6
replies
1.3k
views
Problem with limma in microarray analysis
limma microarray R
2.9 years ago by reza ▴ 300
1
vote
7
replies
14k
views
A problem with download SRA using SRA toolkit
SRAtoolkit NCBI SRA
updated 10 months ago by 43k • written 4.2 years ago by ▴ 300
0
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1
reply
1.8k
views
Comment: Comment: big loss after markduplication
3.0 years ago by reza ▴ 300
0
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0
replies
1.8k
views
Comment: Comment: big loss after markduplication
3.0 years ago by reza ▴ 300
0
votes
0
replies
1.8k
views
Comment: Comment: big loss after markduplication
3.0 years ago by reza ▴ 300
0
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1
reply
1.8k
views
Comment: Comment: big loss after markduplication
3.0 years ago by reza ▴ 300
0
votes
1
reply
1.8k
views
Comment: Comment: big loss after markduplication
3.0 years ago by reza ▴ 300
1
vote
10
replies
1.8k
views
big loss after markduplication
MarkDuplicates Re-sequencing Picard
updated 3.0 years ago by ▴ 130 • written 3.0 years ago by ▴ 300
1
vote
1
reply
727
views
variant calling using masked reference genome
Bowtie2 Reference Genome Variant Calling
3.1 years ago by reza ▴ 300
0
votes
1
reply
1.4k
views
Comment: C: error in running Combat function
3.3 years ago by reza ▴ 300
0
votes
1
reply
1.4k
views
Comment: C: error in running Combat function
3.3 years ago by reza ▴ 300
0
votes
1
reply
1.4k
views
Comment: C: error in running Combat function
3.3 years ago by reza ▴ 300
0
votes
6
replies
1.4k
views
error in running Combat function
R sva Combat R studio
3.3 years ago by reza ▴ 300
0
votes
0
replies
700
views
Meta-Analysis of Microarray data (Afyymetrix)
Meta-Analysis Microarray Affymetrix R
3.7 years ago by reza ▴ 300
0
votes
0
replies
565
views
extraction of scaffolds from SOAPdenovo output
next-gen Assembly soapdenovo scaffold
3.9 years ago by reza ▴ 300
0
votes
1
reply
14k
views
Comment: C: A problem with download SRA using SRA toolkit
4.2 years ago by reza ▴ 300
0
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0
replies
7.0k
views
Comment: C: Obtain one vcf file of shared SNPs from input files with different samples using
updated 4.3 years ago by 43k • written 6.8 years ago by ▴ 300
0
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2
replies
768
views
Comment: C: Multiple genome comparison for new genetic markers
4.5 years ago by reza ▴ 300
0
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1
reply
1.1k
views
Comment: C: Issue with Bowtie2 mapping
4.7 years ago by reza ▴ 300
0
votes
1
reply
1.1k
views
Comment: C: Issue with Bowtie2 mapping
4.7 years ago by reza ▴ 300
153 results • Page 1 of 4
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