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0
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2
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1.7k
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Comment:
Comment: Problem when generating hg38 genome indexes using STAR
3.1 years ago by
Sara
▴ 270
0
votes
2
replies
1.7k
views
Comment:
Comment: Problem when generating hg38 genome indexes using STAR
3.1 years ago by
Sara
▴ 270
0
votes
6
replies
1.7k
views
Problem when generating hg38 genome indexes using STAR
STAR
updated 3.1 years ago by
ATpoint
86k • written 3.1 years ago by
Sara
▴ 270
0
votes
1
reply
2.7k
views
Comment:
Comment: error when indexing transcroptome using salmon
3.1 years ago by
Sara
▴ 270
0
votes
1
reply
2.7k
views
Comment:
Comment: error when indexing transcroptome using salmon
3.1 years ago by
Sara
▴ 270
0
votes
1
reply
2.7k
views
Comment:
Comment: error when indexing transcroptome using salmon
3.1 years ago by
Sara
▴ 270
3
votes
8
replies
2.7k
views
error when indexing transcroptome using salmon
Transcriptome
salmon
updated 3.1 years ago by
Rob
7.0k • written 3.1 years ago by
Sara
▴ 270
0
votes
0
replies
487
views
detect the alternative contigs from the RNAseq data
alternative
contigs
3.2 years ago by
Sara
▴ 270
0
votes
1
reply
1.4k
views
Comment:
Comment: obtaining unique identifier for a sample from fastq files
3.3 years ago by
Sara
▴ 270
0
votes
4
replies
1.4k
views
obtaining unique identifier for a sample from fastq files
fastq
3.3 years ago by
Sara
▴ 270
1
vote
1
reply
688
views
extract specific information from fastq and sam files
sequencing
updated 3.3 years ago by
GenoMax
149k • written 3.3 years ago by
Sara
▴ 270
4
votes
2
replies
1.2k
views
DNA to peptide translation and adding to csv file
translation
updated 3.4 years ago by
Pierre Lindenbaum
165k • written 3.4 years ago by
Sara
▴ 270
3
votes
3
replies
867
views
best tool for the pipeline wrapper
pipeline
updated 3.4 years ago by
Istvan Albert
102k • written 3.4 years ago by
Sara
▴ 270
0
votes
0
replies
3.3k
views
Comment:
Comment: collapsing pacbio reads into a single sequence
3.5 years ago by
Sara
▴ 270
0
votes
1
reply
3.3k
views
Comment:
Comment: collapsing pacbio reads into a single sequence
3.5 years ago by
Sara
▴ 270
2
votes
5
replies
3.3k
views
collapsing pacbio reads into a single sequence
pacbio
3.5 years ago by
Sara
▴ 270
2
votes
2
replies
1.0k
views
Available annotation file for the PacBio Iso-seq data
sequencing
updated 3.7 years ago by
GenoMax
149k • written 5.1 years ago by
Sara
▴ 270
3
votes
3
replies
1.5k
views
quick way of contamination identification from fastq file
alignment
updated 3.7 years ago by
MatthewP
★ 1.4k • written 3.7 years ago by
Sara
▴ 270
0
votes
1
reply
1.4k
views
Comment:
Comment: problem with SNPs and Indels detectiong useng WGS data
3.9 years ago by
Sara
▴ 270
1
vote
4
replies
1.4k
views
problem with SNPs and Indels detectiong useng WGS data
WGS
updated 3.9 years ago by
Ram
44k • written 3.9 years ago by
Sara
▴ 270
0
votes
0
replies
691
views
Comment:
Comment: low alignment rate of methyl-seq data
4.0 years ago by
Sara
▴ 270
1
vote
2
replies
691
views
low alignment rate of methyl-seq data
alignment
4.0 years ago by
Sara
▴ 270
0
votes
0
replies
611
views
methylseq data analysis using bismark and low alignment rate
next-gen
4.1 years ago by
Sara
▴ 270
4
votes
6
replies
2.5k
views
UMI and the reason of high duplicate rate
rna-seq
updated 4.3 years ago by
swbarnes2
14k • written 4.3 years ago by
Sara
▴ 270
0
votes
2
replies
2.5k
views
Comment:
A: UMI and the reason of high duplicate rate
4.3 years ago by
Sara
▴ 270
1
vote
1
reply
883
views
compare expression for 1 gene between more than 2 samples
RNA-Seq
updated 4.3 years ago by
noahhelton98
• 0 • written 4.4 years ago by
Sara
▴ 270
5
votes
2
replies
6.4k
views
CIBERSORT input file format
RNA-Seq
CIBERSORT
updated 4.4 years ago by
ShahiRB
▴ 30 • written 4.9 years ago by
Sara
▴ 270
2
votes
2
replies
1.2k
views
correct order for pathway analysis
gene
4.4 years ago by
Sara
▴ 270
1
vote
1
reply
1.6k
views
a lot of missing variants when using DRAGEN for variant calling
next-gen
4.4 years ago by
Sara
▴ 270
0
votes
1
reply
2.1k
views
comparing 2 VCF files
SNP
4.5 years ago by
Sara
▴ 270
0
votes
2
replies
929
views
building container in singularity
software error
4.5 years ago by
Sara
▴ 270
3
votes
4
replies
2.7k
views
VCF evaluation using RTG.jar vcfeval
SNP
updated 4.6 years ago by
Len Trigg
★ 1.6k • written 4.6 years ago by
Sara
▴ 270
1
vote
2
replies
986
views
missing file in rtg-tools
SNP
4.6 years ago by
Sara
▴ 270
0
votes
2
replies
2.1k
views
difference between DRAGEN and GATK
genome
4.6 years ago by
Sara
▴ 270
0
votes
0
replies
1.2k
views
Comment:
C: how can I find the download link for a famous dataset
4.6 years ago by
Sara
▴ 270
0
votes
1
reply
1.2k
views
Comment:
C: how can I find the download link for a famous dataset
4.6 years ago by
Sara
▴ 270
1
vote
4
replies
1.2k
views
how can I find the download link for a famous dataset
sequencing
4.6 years ago by
Sara
▴ 270
0
votes
2
replies
882
views
identifying the command for creating VCF file
SNP
updated 4.6 years ago by
Carambakaracho
★ 3.3k • written 4.6 years ago by
Sara
▴ 270
1
vote
0
replies
586
views
evaluate the quality of VCF files for CNVs
sequencing
genome
updated 4.6 years ago by
Pierre Lindenbaum
165k • written 4.6 years ago by
Sara
▴ 270
0
votes
3
replies
2.3k
views
read count normalization for spike
RNA-Seq
updated 4.7 years ago by
Biostar
20 • written 7.9 years ago by
Sara
▴ 270
1
vote
1
reply
1.6k
views
correct order of cut off and normalization in RNAseq data
RNA-Seq
updated 4.8 years ago by
ATpoint
86k • written 4.8 years ago by
Sara
▴ 270
0
votes
2
replies
609
views
legal issues about running the analysis on the cloud
next-gen
updated 4.9 years ago by
Devon Ryan
105k • written 4.9 years ago by
Sara
▴ 270
0
votes
2
replies
1.2k
views
tool for the new protocol of WES for CNV detection
next-gen
updated 5.0 years ago by
German.M.Demidov
★ 2.9k • written 5.0 years ago by
Sara
▴ 270
3
votes
2
replies
965
views
uploading the files to the cloud
RNA-Seq
updated 5.0 years ago by
h.mon
35k • written 5.0 years ago by
Sara
▴ 270
0
votes
5
replies
978
views
location of integrated vector in the genome in CRISPR experiment
genome
updated 5.0 years ago by
lieven.sterck
15k • written 5.0 years ago by
Sara
▴ 270
0
votes
0
replies
978
views
Comment:
C: location of integrated vector in the genome in CRISPR experiment
5.0 years ago by
Sara
▴ 270
0
votes
0
replies
978
views
Comment:
C: location of integrated vector in the genome in CRISPR experiment
5.0 years ago by
Sara
▴ 270
0
votes
1
reply
590
views
INDELs frequency at the on-target site in CRISPR experiment
genome
5.0 years ago by
Sara
▴ 270
3
votes
3
replies
2.7k
views
create consensus sequence from bam file
alignment
5.0 years ago by
Sara
▴ 270
0
votes
1
reply
2.7k
views
Comment:
A: create consensus sequence from bam file
5.0 years ago by
Sara
▴ 270
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