User: Edalat

gravatar for Edalat
Edalat30
Reputation:
30
Status:
New User
Location:
Last seen:
1 year, 10 months ago
Joined:
2 years, 11 months ago
Email:
e**********@yahoo.com

Posts by Edalat

<prev • 88 results • page 1 of 9 • next >
0
votes
0
answers
680
views
0
answers
co-expression network with meta-analysis result
... hello all, I did meta-analysis for some control/treatment human RNAseq data,for long non coding and coding data. for drawing co-expression network I want to use only genes of meta-analysis,instead of all genes,is it true? ...
network co-expression meta-analysis written 22 months ago by Edalat30
0
votes
0
answers
616
views
0
answers
co-expression network with meta-analysis result
... hello all, I did meta-analysis for some control/treatment human RNAseq data,for long non coding and coding data. for drawing co-expression network I want to use only genes of meta-analysis result instead of all genes,is it true? ...
network meta-analysis co-expression network written 22 months ago by Edalat30
0
votes
1
answer
1.3k
views
1
answers
Comment: C: adj p-value for meta-analysis
... no,I got adjusted p-value. I mean should I convert them to FDR adj p-value for high accuracy?or adjusted p-value have high accuracy? ...
written 22 months ago by Edalat30
2
votes
1
answer
1.3k
views
1
answer
adj p-value for meta-analysis
... I did meta-analysis by metaRNAseq package,it used adj p-value( method="BH"),should I convert adj p-value to fdr adj p-value or not? if yes,what package do you suggest? ...
adj pvalue meta-analysis fdr adj p-value written 22 months ago by Edalat30 • updated 22 months ago by ATpoint19k
0
votes
0
answers
497
views
0
answers
Comment: C: number of genes after meta_analysis
... I did meta-analysis for some human RNAseq data of effecting some drug on prostate cancer(control,case) ...
written 22 months ago by Edalat30
0
votes
0
answers
497
views
0
answers
number of genes after meta_analysis
... hi all, in result of meta_analysis of RNAseq data, I have 3000 or 4000 genes ,this number of genes is abnormal?my supervisor said we should have around 200 genes ...
meta-analysis rna-seq written 22 months ago by Edalat30
1
vote
0
answers
494
views
0
answers
genes that are declared DE in the meta-analysis
... hello all, I did meta-analysis for some RNA-seq data,after meta-analysis I find genes that are declared DE in the meta-analysis but were not identified ed in any of the individual studies alone. Are these genes valuable? in addition the number of genes that are identified ed DE in individual stu ...
meta-analysis rna-seq written 23 months ago by Edalat30
0
votes
0
answers
609
views
0
answers
up-regulated and down-regulated genes in metaRNAseq
... hello, how can I determine up-regulated and down-regulated genes in result of metaRNAseq? ...
metarnaseq written 24 months ago by Edalat30
0
votes
0
answers
571
views
0
answers
Comment: C: how investigate genes after meta-analysis in each experiment
... I want to Check out effect of a drug on a cancer of several RNA-seq data.is it enough? ...
written 2.1 years ago by Edalat30
0
votes
0
answers
571
views
0
answers
how investigate genes after meta-analysis in each experiment
... hello everyone, after meta-analysis I want to investigate genes in each experiment,for example I want to know "gene1" that is up-regulated gene in meta-analysis, is up-regulate in each experiment too or not.what should I do? I should determine DEG in each experiment and compare? I should say that I ...
deseq2 meta-analysis metaseq deg written 2.1 years ago by Edalat30 • updated 2.0 years ago by Biostar ♦♦ 20

Latest awards to Edalat

Supporter 2.4 years ago, voted at least 25 times.
Rising Star 2.8 years ago, created 50 posts within first three months of joining.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1539 users visited in the last hour