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Comment: Comment: Best way to deal with overlapping read names in merged BAM files
13 hours ago by Pierre Lindenbaum 161k
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229
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Answer: Answer: Best way to deal with overlapping read names in merged BAM files
13 hours ago by Pierre Lindenbaum 161k
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100
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Answer: Answer: CombineGVCFs vs. MergeVcfs
16 hours ago by Pierre Lindenbaum 161k
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126
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Answer: Answer: Problem with Sniffles pipeline and SV calling help
17 hours ago by Pierre Lindenbaum 161k
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1.2k
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Comment: Comment: VCF to human friendly form?
22 hours ago by Pierre Lindenbaum 161k
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325
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Comment: Comment: How to download large-scale cDNA sequences from NCBI effectively ?
2 days ago by Pierre Lindenbaum 161k
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2
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325
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Answer: Answer: How to download large-scale cDNA sequences from NCBI effectively ?
2 days ago by Pierre Lindenbaum 161k
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491
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Comment: Comment: Can you suggest a protein PDB that has two chainst but only 50 total number of a
3 days ago by Pierre Lindenbaum 161k
4
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1
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491
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Answer: Answer: Can you suggest a protein PDB that has two chainst but only 50 total number of a
3 days ago by Pierre Lindenbaum 161k
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1
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252
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Comment: Comment: DepMap: siRNA and CRSIPR discrepancy
4 days ago by Pierre Lindenbaum 161k
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142
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Answer: Answer: Merging vcf files with bcftools ([E::get_intv] Failed to parse TBX_VCF, was wron
4 days ago by Pierre Lindenbaum 161k
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1
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238
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Comment: Comment: True variants selection
4 days ago by Pierre Lindenbaum 161k
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141
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Comment: Comment: How to reveal real AF of variant if duplicates can't be removed (such as in ampl
4 days ago by Pierre Lindenbaum 161k
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167
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Comment: Comment: Extract Di-nucleotide/Tri-Nucleotide substitution frequencies from MSA/VCF file
5 days ago by Pierre Lindenbaum 161k
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0
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175
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Comment: Comment: Finding variants within a subset of a BAM file
5 days ago by Pierre Lindenbaum 161k
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0
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175
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Answer: Answer: Finding variants within a subset of a BAM file
5 days ago by Pierre Lindenbaum 161k
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139
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Comment: Comment: Help with generating annotation database for dog genome to use in ANNOVAR for v
5 days ago by Pierre Lindenbaum 161k
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1
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164
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Comment: Comment: Can't figure out plink --sample-diff
5 days ago by Pierre Lindenbaum 161k
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206
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Answer: Answer: Downsampling long-read BAM files
5 days ago by Pierre Lindenbaum 161k
1
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0
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386
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Answer: Answer: Database or Tool: Identifying Gene Regions (Exon/Intron/UTR) from Chromosome Pos
6 days ago by Pierre Lindenbaum 161k
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1
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386
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Comment: Comment: Database or Tool: Identifying Gene Regions (Exon/Intron/UTR) from Chromosome Pos
6 days ago by Pierre Lindenbaum 161k
0
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1
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612
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Comment: Comment: Why are the basics so complicated? Basic coverage filtering for VCF files
6 days ago by Pierre Lindenbaum 161k
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0
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263
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Comment: Comment: Using GPUs in snakemake
6 days ago by Pierre Lindenbaum 161k
1
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263
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Comment: Comment: Using GPUs in snakemake
6 days ago by Pierre Lindenbaum 161k
3
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243
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Comment: Comment: Ubuntu storage space is decreasing automatically
6 days ago by Pierre Lindenbaum 161k
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0
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243
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Comment: Comment: Ubuntu storage space is decreasing automatically
6 days ago by Pierre Lindenbaum 161k
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0
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116
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Answer: Answer: BCFTools install vcfmerge.o error
6 days ago by Pierre Lindenbaum 161k
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1
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307
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Comment: Comment: What is the samtools flag used in bamPEFragment?
6 days ago by Pierre Lindenbaum 161k
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0
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198
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Answer: Answer: small RNA creating .bam from .sam file
7 days ago by Pierre Lindenbaum 161k
1
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1
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603
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Comment: Comment: bash script
7 days ago by Pierre Lindenbaum 161k
1
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1
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210
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Answer: Answer: latest dbSNP (ncbi) which genome assembly
7 days ago by Pierre Lindenbaum 161k
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0
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158
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Comment: Comment: How do I run fastq-dump on multiple prefetched files at once?
8 days ago by Pierre Lindenbaum 161k
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0
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247
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Comment: Comment: Regions not clear in VCF
8 days ago by Pierre Lindenbaum 161k
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247
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Comment: Comment: Regions not clear in VCF
8 days ago by Pierre Lindenbaum 161k
1
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0
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343
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Comment: Comment: How to I use prefetch (SRAtoolkit) on multiple accessions all at one?
9 days ago by Pierre Lindenbaum 161k
1
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1
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343
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Answer: Answer: How to I use prefetch (SRAtoolkit) on multiple accessions all at one?
9 days ago by Pierre Lindenbaum 161k
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0
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332
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Comment: Comment: Help with finding Genomic coordinates and exon they belong to
10 days ago by Pierre Lindenbaum 161k
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0
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332
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Comment: Comment: Help with finding Genomic coordinates and exon they belong to
10 days ago by Pierre Lindenbaum 161k
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0
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495
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Comment: Comment: Artificial deletion in bam
10 days ago by Pierre Lindenbaum 161k
0
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1
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455
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Comment: Comment: seg fault, core dumped with manta 1.6.0
10 days ago by Pierre Lindenbaum 161k
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0
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590
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Comment: Comment: The bioinformatics paper reappears, but the results are significantly different
11 days ago by Pierre Lindenbaum 161k
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0
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495
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Comment: Comment: Artificial deletion in bam
11 days ago by Pierre Lindenbaum 161k
2
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2
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495
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Answer: Answer: Artificial deletion in bam
11 days ago by Pierre Lindenbaum 161k
1
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0
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205
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Comment: Comment: Trying to write bwa mem -> samtools view -> samtools sort loop
11 days ago by Pierre Lindenbaum 161k
0
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0
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316
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Comment: Comment: Tool to Identify Gene, Regulatory Role, and Function at Integration Sites
11 days ago by Pierre Lindenbaum 161k
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1
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303
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Comment: Comment: Incongruencies in GT assignment by Freebayes
11 days ago by Pierre Lindenbaum 161k
0
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1
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316
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Comment: Comment: Tool to Identify Gene, Regulatory Role, and Function at Integration Sites
11 days ago by Pierre Lindenbaum 161k
0
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1
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303
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Comment: Comment: Incongruencies in GT assignment by Freebayes
11 days ago by Pierre Lindenbaum 161k
0
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1
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469
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Comment: Comment: FreeBayes encountered a sudden error
11 days ago by Pierre Lindenbaum 161k
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0
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510
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Comment: Comment: frequency of each variant per sample
11 days ago by Pierre Lindenbaum 161k
12,380 results • Page 1 of 248
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