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Comment:
Comment: Chromium 5’ Next GEM single cell STARsolo
4 months ago by
dsull
★ 7.2k
0
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0
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1.3k
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Comment:
Comment: Kallisto: to scaledTPM or not to scaledTPM
4 months ago by
dsull
★ 7.2k
0
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0
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803
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Comment:
Comment: Chromium 5’ Next GEM single cell STARsolo
4 months ago by
dsull
★ 7.2k
0
votes
1
reply
803
views
Answer:
Answer: Chromium 5’ Next GEM single cell STARsolo
4 months ago by
dsull
★ 7.2k
0
votes
1
reply
1.3k
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Comment:
Comment: Kallisto: to scaledTPM or not to scaledTPM
4 months ago by
dsull
★ 7.2k
1
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0
replies
535
views
Comment:
Comment: Unaligned rRNA in RNAseq in balb/cj mouse
5 months ago by
dsull
★ 7.2k
1
vote
1
reply
535
views
Answer:
Answer: Unaligned rRNA in RNAseq in balb/cj mouse
5 months ago by
dsull
★ 7.2k
0
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0
replies
610
views
Comment:
Comment: Script for Rstudio
5 months ago by
dsull
★ 7.2k
1
vote
1
reply
810
views
Comment:
Comment: Segmentation fault (core dumped)
5 months ago by
dsull
★ 7.2k
1
vote
1
reply
810
views
Comment:
Comment: Segmentation fault (core dumped)
5 months ago by
dsull
★ 7.2k
3
votes
1
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1.1k
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Answer:
Answer: If changing the RNA-Seq count normalisation method changes the DGE and downstrea
5 months ago by
dsull
★ 7.2k
1
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1
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1.1k
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Comment:
Comment: If changing the RNA-Seq count normalisation method changes the DGE and downstrea
5 months ago by
dsull
★ 7.2k
1
vote
0
replies
646
views
Comment:
Comment: Cutadapt&FastQC:sequence length disturbution failed after adapter trimming
5 months ago by
dsull
★ 7.2k
1
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1
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646
views
Answer:
Answer: Cutadapt&FastQC:sequence length disturbution failed after adapter trimming
5 months ago by
dsull
★ 7.2k
1
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0
replies
636
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Comment:
Comment: Genotype File
5 months ago by
dsull
★ 7.2k
1
vote
1
reply
646
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Comment:
Comment: DNA SPRITE Expirment Benchmark
5 months ago by
dsull
★ 7.2k
2
votes
1
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646
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Answer:
Answer: DNA SPRITE Expirment Benchmark
5 months ago by
dsull
★ 7.2k
2
votes
1
reply
824
views
Comment:
Comment: Non-existent transcript as a result from Salmon
5 months ago by
dsull
★ 7.2k
0
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1
reply
2.1k
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Comment:
Comment: Is "training", fine tuning, or overfitting on "external independent validation d
5 months ago by
dsull
★ 7.2k
0
votes
2
replies
2.1k
views
Comment:
Comment: Is "training", fine tuning, or overfitting on "external independent validation d
5 months ago by
dsull
★ 7.2k
0
votes
1
reply
2.1k
views
Comment:
Comment: Is "training", fine tuning, or overfitting on "external independent validation d
5 months ago by
dsull
★ 7.2k
1
vote
1
reply
2.1k
views
Comment:
Comment: Is "training", fine tuning, or overfitting on "external independent validation d
5 months ago by
dsull
★ 7.2k
2
votes
1
reply
2.1k
views
Comment:
Comment: Is "training", fine tuning, or overfitting on "external independent validation d
5 months ago by
dsull
★ 7.2k
1
vote
1
reply
1.1k
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Comment:
Comment: Low mapping rate using SALMON
5 months ago by
dsull
★ 7.2k
0
votes
0
replies
316
views
Comment:
Comment: How can you separate and ignore the expression changes caused by single cell iso
5 months ago by
dsull
★ 7.2k
1
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1
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1.1k
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Comment:
Comment: Low mapping rate using SALMON
5 months ago by
dsull
★ 7.2k
0
votes
0
replies
771
views
Comment:
Comment: Best workflow for identification of isoforms and splice variants
5 months ago by
dsull
★ 7.2k
2
votes
2
replies
771
views
Comment:
Comment: Best workflow for identification of isoforms and splice variants
6 months ago by
dsull
★ 7.2k
1
vote
0
replies
1.4k
views
Comment:
Comment: What bioinformatics codes would you use for performance benchmarking on a new sy
6 months ago by
dsull
★ 7.2k
0
votes
0
replies
380
views
Answer:
Answer: unmapped reads Kallisto bulk RNA-seq
6 months ago by
dsull
★ 7.2k
0
votes
2
replies
1.1k
views
Comment:
Comment: Why do I have * in my FASTA?
6 months ago by
dsull
★ 7.2k
0
votes
0
replies
919
views
Comment:
Comment: I encountered a problem while using Mageck to analysis CRISPR screen data
6 months ago by
dsull
★ 7.2k
2
votes
1
reply
760
views
Comment:
Comment: RNA seq mapping
6 months ago by
dsull
★ 7.2k
2
votes
0
replies
410
views
Answer:
Answer: extracting cell specific reads from cellranger BAM output file
6 months ago by
dsull
★ 7.2k
2
votes
0
replies
886
views
Comment:
Comment: how to calculate correlations between sparse data
6 months ago by
dsull
★ 7.2k
0
votes
1
reply
886
views
Comment:
Comment: how to calculate correlations between sparse data
6 months ago by
dsull
★ 7.2k
0
votes
1
reply
1.1k
views
Comment:
Comment: Weird insert size distribution plot
6 months ago by
dsull
★ 7.2k
2
votes
0
replies
415
views
Comment:
Comment: Understanding the Principle and Mechanism of K-mer Alignment in Bioinformatics
updated 6 months ago by
GenoMax
149k • written 6 months ago by
dsull
★ 7.2k
1
vote
0
replies
1.1k
views
Comment:
Comment: Kallisto - Effect of Kmer size on quantification?
6 months ago by
dsull
★ 7.2k
0
votes
1
reply
1.1k
views
Comment:
Comment: Kallisto - Effect of Kmer size on quantification?
6 months ago by
dsull
★ 7.2k
0
votes
1
reply
1.1k
views
Comment:
Comment: Kallisto - Effect of Kmer size on quantification?
6 months ago by
dsull
★ 7.2k
1
vote
1
reply
1.1k
views
Comment:
Comment: Kallisto - Effect of Kmer size on quantification?
6 months ago by
dsull
★ 7.2k
0
votes
0
replies
579
views
Answer:
Answer: Is there any tool that can search for a pattern (while allowing mismatch) in fas
6 months ago by
dsull
★ 7.2k
2
votes
1
reply
1.6k
views
Comment:
Comment: How to improve a bioinformatics study and paper so that it is not considered "to
6 months ago by
dsull
★ 7.2k
5
votes
1
reply
1.6k
views
Answer:
Answer: How to improve a bioinformatics study and paper so that it is not considered "to
6 months ago by
dsull
★ 7.2k
0
votes
0
replies
439
views
Answer:
Answer: Fragment size of published single end RNAseq data
6 months ago by
dsull
★ 7.2k
0
votes
1
reply
899
views
Comment:
Comment: How do decide if a processed scRNA-seq data is read counts or UMI format ?
6 months ago by
dsull
★ 7.2k
2
votes
1
reply
403
views
Answer:
Answer: kb count -x parameter - what are the three parts?
6 months ago by
dsull
★ 7.2k
0
votes
0
replies
1.2k
views
Comment:
Comment: 10X #3' RNA seq - How is strandedness determined?
6 months ago by
dsull
★ 7.2k
2
votes
0
replies
393
views
Answer:
Answer: I am getting an error with Kallisto Bustools wrapper (kb) command to create an i
6 months ago by
dsull
★ 7.2k
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