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Comment: Comment: Troubleshooting RNA-seq data with DNA contamination
3 months ago by dsull ★ 5.8k
2
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2
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988
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Comment: Comment: Can I estimate RNA velocity in Visium Spatial Gene Expression for FFPE
3 months ago by dsull ★ 5.8k
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988
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Comment: Comment: Can I estimate RNA velocity in Visium Spatial Gene Expression for FFPE
3 months ago by dsull ★ 5.8k
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2.0k
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Comment: Comment: Determining computer time required
3 months ago by dsull ★ 5.8k
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570
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Comment: Comment: Problem in Salmon when indexing Rattus_norvegicus
3 months ago by dsull ★ 5.8k
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2.0k
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Comment: Comment: Determining computer time required
3 months ago by dsull ★ 5.8k
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2
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2.0k
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Comment: Comment: Determining computer time required
3 months ago by dsull ★ 5.8k
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2
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2.0k
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Comment: Comment: Determining computer time required
3 months ago by dsull ★ 5.8k
3
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1
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314
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Answer: Answer: Using Expression of a Gene as a Linear Regression Variable
3 months ago by dsull ★ 5.8k
2
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1
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347
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Answer: Answer: STAR index generation killed after "inserting junctions into the genome indices"
updated 3 months ago by 81k • written 3 months ago by ★ 5.8k
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832
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Comment: Comment: Deciding if a study used Bulk or single-cell RNA sequencing using the GEO data
3 months ago by dsull ★ 5.8k
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832
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Comment: Comment: Deciding if a study used Bulk or single-cell RNA sequencing using the GEO data
3 months ago by dsull ★ 5.8k
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2.0k
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Comment: Comment: First experiences matter
3 months ago by dsull ★ 5.8k
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1
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681
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Comment: Comment: Log2 transformation is well used, but is there a good paper that can be used as
3 months ago by dsull ★ 5.8k
2
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1
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704
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Comment: Comment: Tests for the linear and non-linear relationship between two genes
3 months ago by dsull ★ 5.8k
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820
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Comment: Comment: Inquiry Regarding Cutoff for Survival Analysis
3 months ago by dsull ★ 5.8k
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0
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544
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Comment: Comment: Kallisto-Bustools Output prpblems
3 months ago by dsull ★ 5.8k
1
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1
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544
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Answer: Answer: Kallisto-Bustools Output prpblems
4 months ago by dsull ★ 5.8k
0
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0
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545
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Comment: Comment: Kallisto-bustools output to Seurat Object
4 months ago by dsull ★ 5.8k
2
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1
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545
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Answer: Answer: Kallisto-bustools output to Seurat Object
4 months ago by dsull ★ 5.8k
0
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1
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749
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Comment: Comment: bwa-mem reproducibility
4 months ago by dsull ★ 5.8k
0
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1
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749
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Answer: Answer: bwa-mem reproducibility
4 months ago by dsull ★ 5.8k
3
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2
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1.7k
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Comment: Comment: What apps can read large FASTQ files on Windows?
4 months ago by dsull ★ 5.8k
3
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1
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1.1k
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Answer: Answer: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 202
4 months ago by dsull ★ 5.8k
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1
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363
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Comment: Comment: what should I do if I get a compromised sample of scRNA-seq data?
4 months ago by dsull ★ 5.8k
1
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0
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721
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Comment: Comment: kallisto index build difference according to version
4 months ago by dsull ★ 5.8k
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1
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721
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Comment: Comment: kallisto index build difference according to version
4 months ago by dsull ★ 5.8k
1
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0
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596
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Comment: Comment: Plotting a pvalue threshold for an FDR corrected pvalue <.05 when thats not pres
4 months ago by dsull ★ 5.8k
5
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841
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Comment: Comment: p-value combination methods
4 months ago by dsull ★ 5.8k
1
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1
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570
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Comment: Comment: Should SMART-seq2 data be deduplicated in STAR?
4 months ago by dsull ★ 5.8k
1
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1
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570
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Answer: Answer: Should SMART-seq2 data be deduplicated in STAR?
4 months ago by dsull ★ 5.8k
1
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0
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1.1k
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Comment: Comment: UMAP or TSNE for single cells?
5 months ago by dsull ★ 5.8k
1
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1
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988
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Comment: Comment: Can I estimate RNA velocity in Visium Spatial Gene Expression for FFPE
5 months ago by dsull ★ 5.8k
2
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0
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1.1k
views
Comment: Comment: UMAP or TSNE for single cells?
5 months ago by dsull ★ 5.8k
0
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1
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611
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Comment: Comment: Three questions about datasets
5 months ago by dsull ★ 5.8k
0
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1
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611
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Answer: Answer: Three questions about datasets
5 months ago by dsull ★ 5.8k
1
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0
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637
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Comment: Comment: Smart seq3 analysis
5 months ago by dsull ★ 5.8k
2
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1
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637
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Answer: Answer: Smart seq3 analysis
5 months ago by dsull ★ 5.8k
0
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1
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1.1k
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Comment: Comment: Mitochondrial genes - TPM calculation bulk RNA-Seq
5 months ago by dsull ★ 5.8k
2
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0
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564
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Answer: Answer: salmon for gene expression quantification
5 months ago by dsull ★ 5.8k
1
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1
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662
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Answer: Answer: Quality filtering prior to pseudoalignment
5 months ago by dsull ★ 5.8k
3
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1
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658
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Answer: Answer: Why am I getting different results with kallisto?
5 months ago by dsull ★ 5.8k
0
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0
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880
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Comment: Comment: Isaac aligner V4 genome aligner questions
5 months ago by dsull ★ 5.8k
2
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1
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745
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Comment: Comment: RNA-Seq: Comparing Expression between Cancer Grades
5 months ago by dsull ★ 5.8k
1
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0
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656
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Comment: Comment: Best way to use k-mers as a predictor in my neural network
5 months ago by dsull ★ 5.8k
1
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0
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310
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Answer: Answer: Intenger encoding versus one-hot encoding for chromosome as a predictor in a neu
5 months ago by dsull ★ 5.8k
0
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0
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491
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Comment: Comment: Queries on Tophat and Cufflinks Data
5 months ago by dsull ★ 5.8k
1
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0
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399
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Comment: Comment: Converting STAR Gene-level alignment to TPM expression
5 months ago by dsull ★ 5.8k
0
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1
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491
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Comment: Comment: Queries on Tophat and Cufflinks Data
5 months ago by dsull ★ 5.8k
1
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1
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995
views
Answer: Answer: Best command line tool for downloading sequencing reads
6 months ago by dsull ★ 5.8k
593 results • Page 2 of 12
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