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Comment:
Comment: Troubleshooting RNA-seq data with DNA contamination
3 months ago by
dsull
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710
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Comment:
Comment: Troubleshooting RNA-seq data with DNA contamination
3 months ago by
dsull
★ 5.8k
0
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1
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710
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Comment:
Comment: Troubleshooting RNA-seq data with DNA contamination
3 months ago by
dsull
★ 5.8k
0
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1
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710
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Comment:
Comment: Troubleshooting RNA-seq data with DNA contamination
3 months ago by
dsull
★ 5.8k
2
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2
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994
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Comment:
Comment: Can I estimate RNA velocity in Visium Spatial Gene Expression for FFPE
3 months ago by
dsull
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1
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994
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Comment:
Comment: Can I estimate RNA velocity in Visium Spatial Gene Expression for FFPE
3 months ago by
dsull
★ 5.8k
0
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0
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2.0k
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Comment:
Comment: Determining computer time required
3 months ago by
dsull
★ 5.8k
0
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0
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574
views
Comment:
Comment: Problem in Salmon when indexing Rattus_norvegicus
3 months ago by
dsull
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1
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0
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2.0k
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Comment:
Comment: Determining computer time required
3 months ago by
dsull
★ 5.8k
0
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2
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2.0k
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Comment:
Comment: Determining computer time required
3 months ago by
dsull
★ 5.8k
1
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2
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2.0k
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Comment:
Comment: Determining computer time required
3 months ago by
dsull
★ 5.8k
3
votes
1
reply
317
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Answer:
Answer: Using Expression of a Gene as a Linear Regression Variable
3 months ago by
dsull
★ 5.8k
2
votes
1
reply
351
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Answer:
Answer: STAR index generation killed after "inserting junctions into the genome indices"
updated 3 months ago by
ATpoint
81k • written 3 months ago by
dsull
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0
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0
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843
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Comment:
Comment: Deciding if a study used Bulk or single-cell RNA sequencing using the GEO data
3 months ago by
dsull
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0
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0
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843
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Comment:
Comment: Deciding if a study used Bulk or single-cell RNA sequencing using the GEO data
3 months ago by
dsull
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4
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0
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2.0k
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Comment:
Comment: First experiences matter
3 months ago by
dsull
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1
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1
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682
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Comment:
Comment: Log2 transformation is well used, but is there a good paper that can be used as
3 months ago by
dsull
★ 5.8k
2
votes
1
reply
707
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Comment:
Comment: Tests for the linear and non-linear relationship between two genes
3 months ago by
dsull
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0
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0
replies
829
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Comment:
Comment: Inquiry Regarding Cutoff for Survival Analysis
4 months ago by
dsull
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0
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0
replies
548
views
Comment:
Comment: Kallisto-Bustools Output prpblems
4 months ago by
dsull
★ 5.8k
1
vote
1
reply
548
views
Answer:
Answer: Kallisto-Bustools Output prpblems
4 months ago by
dsull
★ 5.8k
0
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0
replies
554
views
Comment:
Comment: Kallisto-bustools output to Seurat Object
4 months ago by
dsull
★ 5.8k
2
votes
1
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554
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Answer:
Answer: Kallisto-bustools output to Seurat Object
4 months ago by
dsull
★ 5.8k
0
votes
1
reply
755
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Comment:
Comment: bwa-mem reproducibility
4 months ago by
dsull
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0
votes
1
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755
views
Answer:
Answer: bwa-mem reproducibility
4 months ago by
dsull
★ 5.8k
3
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2
replies
1.7k
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Comment:
Comment: What apps can read large FASTQ files on Windows?
4 months ago by
dsull
★ 5.8k
3
votes
1
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1.1k
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Answer:
Answer: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 202
4 months ago by
dsull
★ 5.8k
0
votes
1
reply
364
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Comment:
Comment: what should I do if I get a compromised sample of scRNA-seq data?
4 months ago by
dsull
★ 5.8k
1
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0
replies
741
views
Comment:
Comment: kallisto index build difference according to version
4 months ago by
dsull
★ 5.8k
0
votes
1
reply
741
views
Comment:
Comment: kallisto index build difference according to version
4 months ago by
dsull
★ 5.8k
1
vote
0
replies
601
views
Comment:
Comment: Plotting a pvalue threshold for an FDR corrected pvalue <.05 when thats not pres
4 months ago by
dsull
★ 5.8k
5
votes
0
replies
844
views
Comment:
Comment: p-value combination methods
4 months ago by
dsull
★ 5.8k
1
vote
1
reply
575
views
Comment:
Comment: Should SMART-seq2 data be deduplicated in STAR?
4 months ago by
dsull
★ 5.8k
1
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1
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575
views
Answer:
Answer: Should SMART-seq2 data be deduplicated in STAR?
4 months ago by
dsull
★ 5.8k
1
vote
0
replies
1.1k
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Comment:
Comment: UMAP or TSNE for single cells?
5 months ago by
dsull
★ 5.8k
1
vote
1
reply
994
views
Comment:
Comment: Can I estimate RNA velocity in Visium Spatial Gene Expression for FFPE
5 months ago by
dsull
★ 5.8k
2
votes
0
replies
1.1k
views
Comment:
Comment: UMAP or TSNE for single cells?
5 months ago by
dsull
★ 5.8k
0
votes
1
reply
611
views
Comment:
Comment: Three questions about datasets
5 months ago by
dsull
★ 5.8k
0
votes
1
reply
611
views
Answer:
Answer: Three questions about datasets
5 months ago by
dsull
★ 5.8k
1
vote
0
replies
640
views
Comment:
Comment: Smart seq3 analysis
5 months ago by
dsull
★ 5.8k
2
votes
1
reply
640
views
Answer:
Answer: Smart seq3 analysis
5 months ago by
dsull
★ 5.8k
0
votes
1
reply
1.1k
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Comment:
Comment: Mitochondrial genes - TPM calculation bulk RNA-Seq
5 months ago by
dsull
★ 5.8k
2
votes
0
replies
567
views
Answer:
Answer: salmon for gene expression quantification
5 months ago by
dsull
★ 5.8k
1
vote
1
reply
665
views
Answer:
Answer: Quality filtering prior to pseudoalignment
5 months ago by
dsull
★ 5.8k
3
votes
1
reply
661
views
Answer:
Answer: Why am I getting different results with kallisto?
5 months ago by
dsull
★ 5.8k
0
votes
0
replies
882
views
Comment:
Comment: Isaac aligner V4 genome aligner questions
5 months ago by
dsull
★ 5.8k
2
votes
1
reply
749
views
Comment:
Comment: RNA-Seq: Comparing Expression between Cancer Grades
5 months ago by
dsull
★ 5.8k
1
vote
0
replies
664
views
Comment:
Comment: Best way to use k-mers as a predictor in my neural network
5 months ago by
dsull
★ 5.8k
1
vote
0
replies
311
views
Answer:
Answer: Intenger encoding versus one-hot encoding for chromosome as a predictor in a neu
6 months ago by
dsull
★ 5.8k
0
votes
0
replies
494
views
Comment:
Comment: Queries on Tophat and Cufflinks Data
6 months ago by
dsull
★ 5.8k
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