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Showing :
comments
1
vote
0
replies
1.7k
views
Comment:
Comment: "Simplifing" a very fragmented genome for visualisation?
2.6 years ago by
Martombo
★ 3.1k
0
votes
0
replies
4.3k
views
Comment:
Comment: Manual annotation of cell types in single cell RNA-seq
2.7 years ago by
Martombo
★ 3.1k
1
vote
1
reply
4.3k
views
Comment:
Comment: Manual annotation of cell types in single cell RNA-seq
2.7 years ago by
Martombo
★ 3.1k
0
votes
1
reply
1.1k
views
Comment:
Comment: MapSplice2 gives error if the thread count (-p value) is greater than one
2.7 years ago by
Martombo
★ 3.1k
1
vote
0
replies
823
views
Comment:
Comment: are there GO families?
2.8 years ago by
Martombo
★ 3.1k
0
votes
0
replies
1.6k
views
Comment:
Comment: Samtools view does not output all reads
3.0 years ago by
Martombo
★ 3.1k
0
votes
0
replies
1.6k
views
Comment:
Comment: Samtools view does not output all reads
3.0 years ago by
Martombo
★ 3.1k
0
votes
0
replies
1.3k
views
Comment:
Comment: samtools idxstats unplaced contigs
3.0 years ago by
Martombo
★ 3.1k
1
vote
1
reply
1.6k
views
Comment:
C: How do I install Boost and the bjam build engine for Cufflinks
3.1 years ago by
Martombo
★ 3.1k
0
votes
0
replies
3.4k
views
Comment:
C: PCA plotting using DESEq2 pipeline
3.1 years ago by
Martombo
★ 3.1k
0
votes
0
replies
3.1k
views
Comment:
C: GSEA pvalue output of 0.0. Can I make it more specific?
3.7 years ago by
Martombo
★ 3.1k
0
votes
0
replies
1.1k
views
Comment:
C: What to use for estimation of transcription factors' activity based on RNAseq da
4.0 years ago by
Martombo
★ 3.1k
1
vote
0
replies
1.2k
views
Comment:
C: RNAfold discriminant error
4.2 years ago by
Martombo
★ 3.1k
0
votes
1
reply
1.2k
views
Comment:
C: RNAfold discriminant error
4.2 years ago by
Martombo
★ 3.1k
0
votes
0
replies
19k
views
Comment:
C: Calculate Percent Spliced In (PSI)
updated 4.3 years ago by
Ram
43k • written 9.9 years ago by
Martombo
★ 3.1k
0
votes
1
reply
19k
views
Comment:
C: Calculate Percent Spliced In (PSI)
updated 4.3 years ago by
Ram
43k • written 9.9 years ago by
Martombo
★ 3.1k
0
votes
1
reply
6.0k
views
Comment:
C: finding differentially expressed genes in three arm treatment RNA seq data
updated 4.3 years ago by
Ram
43k • written 9.9 years ago by
Martombo
★ 3.1k
0
votes
1
reply
6.0k
views
Comment:
C: finding differentially expressed genes in three arm treatment RNA seq data
updated 4.3 years ago by
Ram
43k • written 9.9 years ago by
Martombo
★ 3.1k
1
vote
1
reply
4.1k
views
Comment:
C: Extract expression data of candidate genes from normalized microarray list
updated 4.3 years ago by
Ram
43k • written 9.9 years ago by
Martombo
★ 3.1k
0
votes
1
reply
3.4k
views
Comment:
C: mirDup. MicroRNA prediction. java Error software
updated 4.3 years ago by
Ram
43k • written 9.9 years ago by
Martombo
★ 3.1k
0
votes
0
replies
5.6k
views
Comment:
C: microRNA transcription start site prediction
updated 4.3 years ago by
Ram
43k • written 10.0 years ago by
Martombo
★ 3.1k
2
votes
0
replies
2.7k
views
Comment:
C: why tophat finds overlong introns?
updated 4.3 years ago by
Ram
43k • written 10.0 years ago by
Martombo
★ 3.1k
4
votes
3
replies
2.8k
views
Comment:
C: RNA-Seq counts for all genes?
updated 4.3 years ago by
Ram
43k • written 8.3 years ago by
Martombo
★ 3.1k
1
vote
0
replies
13k
views
Comment:
C: htseq-count for pair-end RNA-seq
updated 4.4 years ago by
Ram
43k • written 8.3 years ago by
Martombo
★ 3.1k
2
votes
0
replies
6.1k
views
Comment:
C: HTSeq-count, problem in handling PE data
updated 4.4 years ago by
Ram
43k • written 8.3 years ago by
Martombo
★ 3.1k
1
vote
1
reply
6.1k
views
Comment:
C: HTSeq-count, problem in handling PE data
updated 4.4 years ago by
Ram
43k • written 8.3 years ago by
Martombo
★ 3.1k
0
votes
0
replies
50k
views
Comment:
C: matching and merging data frames of different lengths
updated 4.4 years ago by
Ram
43k • written 9.9 years ago by
Martombo
★ 3.1k
0
votes
1
reply
50k
views
Comment:
C: matching and merging data frames of different lengths
updated 4.4 years ago by
Ram
43k • written 9.9 years ago by
Martombo
★ 3.1k
1
vote
0
replies
1.1k
views
Comment:
C: predicting 3D structure of protein from DNA sequence
4.4 years ago by
Martombo
★ 3.1k
0
votes
0
replies
5.2k
views
Comment:
C: DESeq2 to analyse OTU differential abundance
updated 4.4 years ago by
Ram
43k • written 8.4 years ago by
Martombo
★ 3.1k
0
votes
0
replies
4.1k
views
Comment:
C: Annotating RNA-Seq exon junctions
updated 4.4 years ago by
Ram
43k • written 8.5 years ago by
Martombo
★ 3.1k
1
vote
0
replies
4.1k
views
Comment:
C: Chip-seq mapping (using bowtie2 & tophat2) What's different ?
updated 4.4 years ago by
Ram
43k • written 8.5 years ago by
Martombo
★ 3.1k
1
vote
0
replies
6.5k
views
Comment:
C: Maths implications: log2 transformation before or after normalisation
4.5 years ago by
Martombo
★ 3.1k
0
votes
1
reply
3.3k
views
Comment:
C: gene_bodyCoverage.py No usable output...why?
4.6 years ago by
Martombo
★ 3.1k
1
vote
1
reply
3.3k
views
Comment:
C: gene_bodyCoverage.py No usable output...why?
4.6 years ago by
Martombo
★ 3.1k
0
votes
1
reply
3.3k
views
Comment:
C: gene_bodyCoverage.py No usable output...why?
4.6 years ago by
Martombo
★ 3.1k
3
votes
0
replies
3.0k
views
Comment:
C: How to change my colnames(count.table) as exactly similar to my rownames(meta)?
4.7 years ago by
Martombo
★ 3.1k
2
votes
1
reply
1.9k
views
Comment:
C: Differential Expression Analysis with batches which have different biological gr
4.8 years ago by
Martombo
★ 3.1k
0
votes
1
reply
2.4k
views
Comment:
C: Iteration to count the number of raw reads
4.8 years ago by
Martombo
★ 3.1k
1
vote
1
reply
3.4k
views
Comment:
C: Is Ingenuity Pathway Analysis still relevant for analyzing RNA-seq data?
4.8 years ago by
Martombo
★ 3.1k
1
vote
0
replies
2.0k
views
Comment:
C: Deseq2 positive results for genes highly variable between replicates
4.8 years ago by
Martombo
★ 3.1k
0
votes
0
replies
1.5k
views
Comment:
C: Error in some hog codes using pyham
4.9 years ago by
Martombo
★ 3.1k
0
votes
1
reply
3.0k
views
Comment:
C: Removing adaptors from smallRNA seq data
4.9 years ago by
Martombo
★ 3.1k
0
votes
1
reply
3.0k
views
Comment:
C: Removing adaptors from smallRNA seq data
4.9 years ago by
Martombo
★ 3.1k
0
votes
1
reply
1.6k
views
Comment:
C: Selecting the consensus/overlapped genes from the DE study
4.9 years ago by
Martombo
★ 3.1k
0
votes
1
reply
1.6k
views
Comment:
C: Finding the best combination of covarites in a multivariate linear regression
4.9 years ago by
Martombo
★ 3.1k
1
vote
1
reply
11k
views
Comment:
C: how to use ESTIMATE to infer tumor purity and stromal score from RNA-seq data?
4.9 years ago by
Martombo
★ 3.1k
1
vote
0
replies
2.0k
views
Comment:
C: Question about differentially expressed genes selection for low sample size data
5.0 years ago by
Martombo
★ 3.1k
0
votes
1
reply
1.9k
views
Comment:
C: Differential analysis using cell-line data with replicate information
5.0 years ago by
Martombo
★ 3.1k
1
vote
0
replies
5.6k
views
Comment:
C: natural log used in Seurat for differential expression
5.2 years ago by
Martombo
★ 3.1k
220 results • Page
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