User: sissypants :)

gravatar for sissypants :)
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Posts by sissypants :)

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Answer: A: GSEA analysis with Mouse (Please give some comments..)
... Have a look at the msigdbr R package. It easily converts mouse gene names to human homolog equivalents. ...
written 7 weeks ago by sissypants :)10
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Data mining to generate a scRNA-seq coexpression network analysis for selected genes
... I need to analyze co-expression of 10 genes among populations of single cells. My approach is: **1. Download scRNA-seq data for selected genes only.from many studies and cells.** Is there any mechanism for downloading scRNA-seq read data for just selected genes of interest? As long as I have a ...
scrna-seq rna-seq coexpression written 4 months ago by sissypants :)10
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JavaScript access to Clustal Omega REST service
... I'm working in JavaScript and need to create a function for multiple protein sequence alignment. I'd prefer a function like the following in which a string of FASTA sequences is passed in and the clustal alignment .txt result is returned. function align(fastaSequences) { // run clustal ...
clustal alignment omega javascript written 3.7 years ago by sissypants :)10
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Comment: C: Multiple Sequence Alignment In Javascript
... I compared the result of this method with Clustal Omega and if your sequences are not highly similar you should forget about this method as it returns garbage. ...
written 3.7 years ago by sissypants :)10

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Popular Question 3.4 years ago, created a question with more than 1,000 views. For JavaScript access to Clustal Omega REST service

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