User: Jack

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Jack70
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Posts by Jack

<prev • 32 results • page 1 of 4 • next >
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Connectivity Map Broad
... Hello, I have a very simple question: The Broad Institute has released the connectivity map some years ago. Which I would very much like to include in my project. So I found [this](http://www.bioconductor.org/packages//2.13/data/experiment/vignettes/DvDdata/inst/doc/DvDdata.pdf) R package which lo ...
cmap broad written 3 months ago by Jack70
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Comment: C: Generate column names on the fly R
... I'm sure that the file will always be correct. Thank you for your code! ...
written 5 months ago by Jack70
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Comment: C: Generate column names on the fly R
... The problem with your solution is when the columns are more... This has to be automated... ...
written 5 months ago by Jack70
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Generate column names on the fly R
... So I have a gziped test file that looks like this: ##ColumnVariables[gene_id] ##ParemeterValue[genome_assembly]=hg19 ##ColumnVariables[column_1] ##ColumnVariables[column_2] AAA 10 48 BBB 3 99 My code for opening the file looks like this: # Specify the filen ...
R regex written 5 months ago by Jack70 • updated 5 months ago by Charles Plessy2.2k
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Comment: C: Download data from ImmGen
... I'm looking for this: `proB.CLP.FL` ...
written 5 months ago by Jack70
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Comment: C: Download data from ImmGen
... If only that would give me some good results... I'm googling those things and getting nowhere. That's the problem... That's why i'm looking for someone with more experience... ...
written 5 months ago by Jack70
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Comment: C: Download data from ImmGen
... I spend all this time looking for the data they are using and can't seem to get anywhere. any suggestions? I'm googling the names in each section but still can't get anywhere ...
written 5 months ago by Jack70
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Download data from ImmGen
... How can I download the data that are listed on the front page of ImmGen? Since it's a Flash website, I can't use HTML to get what I need. ...
immgen written 5 months ago by Jack70
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Comment: C: Opposite of enrichment analysis
... @Qroid I understand what one-sided Fisher's is, but can you explain the concept of left-tailed? ...
written 6 months ago by Jack70
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Comment: C: Opposite of enrichment analysis
... @Qroid more specifically I want to check for depletion. ...
written 6 months ago by Jack70

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