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answers
1
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1
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624
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Answer:
Answer: RefseqID to gene symbol for multiple species
7 months ago by
vkkodali_ncbi
★ 3.7k
3
votes
2
replies
1.8k
views
Answer:
Answer: What does a gene's "aligned length" represent?
7 months ago by
vkkodali_ncbi
★ 3.7k
3
votes
1
reply
745
views
Answer:
Answer: SRA and Bioproject IDs
7 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
866
views
Answer:
Answer: How are duplicated genes named under GTF file?
8 months ago by
vkkodali_ncbi
★ 3.7k
2
votes
0
replies
1.8k
views
Answer:
Answer: How can I transfer gene models to a new assembly?
8 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
593
views
Answer:
Answer: Does STAR aligner use the maximum memory available?
8 months ago by
vkkodali_ncbi
★ 3.7k
1
vote
0
replies
788
views
Answer:
Answer: Any way to retrieve the annotation information of genomes under a bioproject ? (
12 months ago by
vkkodali_ncbi
★ 3.7k
3
votes
1
reply
733
views
Answer:
Answer: Unknown naming convention for genes
14 months ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
574
views
Answer:
Answer: NCBI search with ENTREZ biopython last refseq version tag
14 months ago by
vkkodali_ncbi
★ 3.7k
3
votes
1
reply
1.1k
views
Answer:
Answer: gff file from NCBI RefSeq GCF dataset has an invalid format
14 months ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
633
views
Answer:
Answer: How do I download all genomes with specific ST type from ncbi
18 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
760
views
Answer:
Answer: Help with e-utils: Need one assembly accession from one protein accession
20 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
2
replies
2.5k
views
Answer:
Answer: What is the command to download GTF from NCBI
21 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
606
views
Answer:
Answer: Retrieve nucleotide ID from protein ID
22 months ago by
vkkodali_ncbi
★ 3.7k
3
votes
1
reply
961
views
Answer:
Answer: _1 in gene_ids of human T2T assemby gtf file
21 months ago by
vkkodali_ncbi
★ 3.7k
2
votes
0
replies
1.5k
views
Answer:
Answer: How to get sample details from NCBI datasets
22 months ago by
vkkodali_ncbi
★ 3.7k
4
votes
0
replies
1.2k
views
Answer:
Answer: How to download a large number of protein.faa.gz files from NCBI's FTP site in o
22 months ago by
vkkodali_ncbi
★ 3.7k
1
vote
0
replies
630
views
Answer:
Answer: Parse ncbiRefSeq (other like) annotations
23 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
1.1k
views
Answer:
Answer: Donwloading latest version of Mouse ref genome
23 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
751
views
Answer:
Answer: Conversion of gene symbol to refSeqID
23 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
940
views
Answer:
Answer: Genbank | large multi-isolate project
23 months ago by
vkkodali_ncbi
★ 3.7k
3
votes
1
reply
935
views
Answer:
Answer: How can I get a taxid from an assembly id (e.g., GCA_003223415.1 -> 2026742)
23 months ago by
vkkodali_ncbi
★ 3.7k
3
votes
1
reply
1.3k
views
Answer:
Answer: From GCA identifiers, download Genbank file format?
24 months ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
751
views
Answer:
Answer: Edirect query help: How to determine which querys can be linked to a different d
2.1 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
0
replies
1.4k
views
Answer:
Answer: NCBI Reference Fasta Tar Issues
2.1 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
1.4k
views
Answer:
Answer: convert genome coordinates from b36 to hg19
2.1 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
635
views
Answer:
Answer: The meaning of greter than character (>) in gene position in Genbank files
2.1 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
2.2k
views
Answer:
Answer: Retrieving gene ID using transcripts ID from Entrez database using CLI or Batc
2.1 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
2
replies
1.5k
views
Answer:
Answer: Reference genome
2.2 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
969
views
Answer:
Answer: How to use efetch to download specific gene from whole genome NCBI by linux term
2.2 years ago by
vkkodali_ncbi
★ 3.7k
5
votes
0
replies
1.7k
views
Answer:
Answer: NCBI E-eutilitis not working properly inside a while loop
2.2 years ago by
vkkodali_ncbi
★ 3.7k
2
votes
0
replies
987
views
Answer:
Answer: Is transcript linked with the reference genome
2.2 years ago by
vkkodali_ncbi
★ 3.7k
3
votes
2
replies
1.6k
views
Answer:
Answer: Parse JSON ncbi_datasets summary output
2.3 years ago by
vkkodali_ncbi
★ 3.7k
4
votes
0
replies
1.0k
views
Answer:
Answer: Help to clarify abbreviations and features in NCBI website
2.4 years ago by
vkkodali_ncbi
★ 3.7k
2
votes
0
replies
655
views
Answer:
Answer: Connect SRA Bio Sample to Run
2.4 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
902
views
Answer:
Answer: Biopython download nucleotide records without sequences (or skip huge sequences)
2.4 years ago by
vkkodali_ncbi
★ 3.7k
2
votes
1
reply
1.3k
views
Answer:
Answer: mm39 genePred file
2.4 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
840
views
Answer:
Answer: same rs id with different chgvs annotation in different website
2.4 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
1.2k
views
Answer:
Answer: Exclude reads with mate mapped to a different chr
2.5 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
971
views
Answer:
Answer: problem with retrieving multiple records from Entrez using while read loop
2.5 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
999
views
Answer:
Answer: Extracting GeneID from Dbxref section in GFF file while using featureCounts
2.5 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
1.1k
views
Answer:
Answer: Construction of the reference genome database (GCA_000001405.15_GRCh38) with snp
2.5 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
9.9k
views
Answer:
Answer: How to filter a VCF file with a list of CHR or contig IDs?
2.5 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
852
views
Answer:
Answer: How to download all the genome fasta file for plants?
2.6 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
5.9k
views
Answer:
Answer: Extracting exons and transcripts from gff3/gtf
2.6 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
1.6k
views
Answer:
Answer: How to extract Locus tag from GeneIDs in NCBI for soybean database.
2.8 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
0
replies
1.3k
views
Answer:
Answer: Unable to extract country name from genbank file
2.9 years ago by
vkkodali_ncbi
★ 3.7k
1
vote
1
reply
1.4k
views
Answer:
Answer: Downloading bacterial genomes: correspondence between ftp ncbi identifiers and t
2.9 years ago by
vkkodali_ncbi
★ 3.7k
0
votes
1
reply
2.1k
views
Answer:
Answer: SNPs FILE FOR REFERENCE GENOME (MOUSE - GRCm39)
2.9 years ago by
vkkodali_ncbi
★ 3.7k
2
votes
1
reply
1.3k
views
Answer:
Answer: Issue with NCBI esearch
2.9 years ago by
vkkodali_ncbi
★ 3.7k
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