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5
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0
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1.8k
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Answer: Answer: NCBI E-eutilitis not working properly inside a while loop
2.2 years ago by vkkodali_ncbi ★ 3.7k
2
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0
replies
996
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Answer: Answer: Is transcript linked with the reference genome
2.2 years ago by vkkodali_ncbi ★ 3.7k
0
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0
replies
932
views
Comment: Comment: How to convert transcript-relative coordinates to genomic coordinates?
2.2 years ago by vkkodali_ncbi ★ 3.7k
3
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2
replies
1.6k
views
Answer: Answer: Parse JSON ncbi_datasets summary output
2.3 years ago by vkkodali_ncbi ★ 3.7k
0
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1
reply
2.3k
views
Comment: Comment: genbank to GTF in galaxy
2.3 years ago by vkkodali_ncbi ★ 3.7k
4
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0
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1.0k
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Answer: Answer: Help to clarify abbreviations and features in NCBI website
2.4 years ago by vkkodali_ncbi ★ 3.7k
2
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0
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660
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Answer: Answer: Connect SRA Bio Sample to Run
2.4 years ago by vkkodali_ncbi ★ 3.7k
0
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1
reply
905
views
Answer: Answer: Biopython download nucleotide records without sequences (or skip huge sequences)
2.4 years ago by vkkodali_ncbi ★ 3.7k
2
votes
1
reply
1.3k
views
Answer: Answer: mm39 genePred file
2.5 years ago by vkkodali_ncbi ★ 3.7k
1
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0
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2.0k
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Comment: Comment: Clinvar API help
2.5 years ago by vkkodali_ncbi ★ 3.7k
1
vote
1
reply
846
views
Answer: Answer: same rs id with different chgvs annotation in different website
2.5 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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918
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Comment: Comment: STAR producing an empty BAM file
2.5 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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1.2k
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Comment: Comment: Exclude reads with mate mapped to a different chr
2.5 years ago by vkkodali_ncbi ★ 3.7k
1
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1
reply
1.2k
views
Answer: Answer: Exclude reads with mate mapped to a different chr
2.5 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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982
views
Answer: Answer: problem with retrieving multiple records from Entrez using while read loop
2.5 years ago by vkkodali_ncbi ★ 3.7k
0
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0
replies
1.1k
views
Comment: Comment: Construction of the reference genome database (GCA_000001405.15_GRCh38) with snp
2.5 years ago by vkkodali_ncbi ★ 3.7k
0
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0
replies
1.0k
views
Comment: Comment: Extracting GeneID from Dbxref section in GFF file while using featureCounts
2.5 years ago by vkkodali_ncbi ★ 3.7k
1
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1
reply
1.0k
views
Answer: Answer: Extracting GeneID from Dbxref section in GFF file while using featureCounts
2.5 years ago by vkkodali_ncbi ★ 3.7k
0
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1
reply
1.1k
views
Answer: Answer: Construction of the reference genome database (GCA_000001405.15_GRCh38) with snp
2.5 years ago by vkkodali_ncbi ★ 3.7k
1
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0
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10.0k
views
Comment: Comment: How to filter a VCF file with a list of CHR or contig IDs?
2.5 years ago by vkkodali_ncbi ★ 3.7k
1
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1
reply
10.0k
views
Comment: Comment: How to filter a VCF file with a list of CHR or contig IDs?
2.5 years ago by vkkodali_ncbi ★ 3.7k
1
vote
1
reply
10.0k
views
Answer: Answer: How to filter a VCF file with a list of CHR or contig IDs?
2.5 years ago by vkkodali_ncbi ★ 3.7k
0
votes
0
replies
864
views
Answer: Answer: How to download all the genome fasta file for plants?
2.6 years ago by vkkodali_ncbi ★ 3.7k
0
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0
replies
5.9k
views
Answer: Answer: Extracting exons and transcripts from gff3/gtf
2.6 years ago by vkkodali_ncbi ★ 3.7k
2
votes
2
replies
3.2k
views
Comment: Comment: UCSC knownCanonical hg19 vs. hg38
2.6 years ago by vkkodali_ncbi ★ 3.7k
1
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1
reply
1.6k
views
Answer: Answer: How to extract Locus tag from GeneIDs in NCBI for soybean database.
2.8 years ago by vkkodali_ncbi ★ 3.7k
0
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0
replies
1.3k
views
Answer: Answer: Unable to extract country name from genbank file
2.9 years ago by vkkodali_ncbi ★ 3.7k
1
vote
0
replies
1.4k
views
Comment: Comment: Downloading bacterial genomes: correspondence between ftp ncbi identifiers and t
2.9 years ago by vkkodali_ncbi ★ 3.7k
1
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1
reply
1.4k
views
Answer: Answer: Downloading bacterial genomes: correspondence between ftp ncbi identifiers and t
2.9 years ago by vkkodali_ncbi ★ 3.7k
1
vote
0
replies
2.1k
views
Comment: Comment: SNPs FILE FOR REFERENCE GENOME (MOUSE - GRCm39)
2.9 years ago by vkkodali_ncbi ★ 3.7k
0
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1
reply
2.1k
views
Answer: Answer: SNPs FILE FOR REFERENCE GENOME (MOUSE - GRCm39)
2.9 years ago by vkkodali_ncbi ★ 3.7k
2
votes
1
reply
1.4k
views
Answer: Answer: Issue with NCBI esearch
3.0 years ago by vkkodali_ncbi ★ 3.7k
1
vote
1
reply
1.1k
views
Answer: Answer: Downloading viral database
3.0 years ago by vkkodali_ncbi ★ 3.7k
0
votes
0
replies
2.2k
views
Comment: Comment: Remap GRCh38.p13 to GRCh38
3.0 years ago by vkkodali_ncbi ★ 3.7k
2
votes
1
reply
2.2k
views
Comment: Comment: Remap GRCh38.p13 to GRCh38
3.1 years ago by vkkodali_ncbi ★ 3.7k
1
vote
0
replies
2.2k
views
Comment: Comment: Choosing a single consensus promoter/transcript for each gene (Mouse)
3.1 years ago by vkkodali_ncbi ★ 3.7k
0
votes
1
reply
2.2k
views
Comment: Comment: Choosing a single consensus promoter/transcript for each gene (Mouse)
3.1 years ago by vkkodali_ncbi ★ 3.7k
2
votes
0
replies
1.1k
views
Answer: Answer: bedtools getfasta command
3.1 years ago by vkkodali_ncbi ★ 3.7k
5
votes
2
replies
2.2k
views
Answer: Answer: Choosing a single consensus promoter/transcript for each gene (Mouse)
3.1 years ago by vkkodali_ncbi ★ 3.7k
1
vote
0
replies
2.3k
views
Comment: Comment: How to download entire human protein sequences from RefSeq database hrough comma
3.1 years ago by vkkodali_ncbi ★ 3.7k
0
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1
reply
2.3k
views
Answer: Answer: How to download entire human protein sequences from RefSeq database hrough comma
3.1 years ago by vkkodali_ncbi ★ 3.7k
0
votes
0
replies
5.7k
views
Answer: Answer: Translating gene names to entrez id's
3.1 years ago by vkkodali_ncbi ★ 3.7k
0
votes
0
replies
1.6k
views
Comment: C: Command line Taxa search within SRA / NCBI Trace
3.1 years ago by vkkodali_ncbi ★ 3.7k
2
votes
2
replies
1.6k
views
Answer: A: Command line Taxa search within SRA / NCBI Trace
3.1 years ago by vkkodali_ncbi ★ 3.7k
0
votes
0
replies
803
views
Answer: A: Finding gene of interest in data downloaded from SRA
3.1 years ago by vkkodali_ncbi ★ 3.7k
0
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0
replies
4.0k
views
Comment: C: Batch download genome feature file by RefSeq
3.2 years ago by vkkodali_ncbi ★ 3.7k
0
votes
1
reply
4.0k
views
Comment: C: Batch download genome feature file by RefSeq
3.2 years ago by vkkodali_ncbi ★ 3.7k
1
vote
1
reply
4.0k
views
Answer: A: Batch download genome feature file by RefSeq
3.2 years ago by vkkodali_ncbi ★ 3.7k
0
votes
0
replies
1.2k
views
Comment: C: tsv file genome coverage
3.2 years ago by vkkodali_ncbi ★ 3.7k
0
votes
0
replies
4.0k
views
Comment: C: Batch download genome feature file by RefSeq
3.2 years ago by vkkodali_ncbi ★ 3.7k
386 results • Page 2 of 8
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