User: N Smith

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N Smith10
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Posts by N Smith

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SNPhylo Error Help: there is no SNP and Na/NaN arguement
... Hi All, I'm trying to run snphylo on a VCF file. However, i keep getting the error Removing 2120285 non-autosomal SNPs Error in snpgdsLDpruning(genofile, ld.threshold = ld.threshold, maf = maf.threshold, : There is no SNP! Execution halted I added the line "-autosome.only=FALSE" and got a ne ...
tree snphylo vcf phylogenetic written 3.3 years ago by N Smith10 • updated 3.2 years ago by Biostar ♦♦ 20

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