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questions
1
vote
2
replies
1.7k
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SynChro input files
SynChro
updated 2.1 years ago by
Ram
45k • written 6.2 years ago by
jmah
▴ 30
1
vote
3
replies
4.1k
views
plotting trees in R: node labels from nexus tree files
RevBayes
nexus
ape
R
ggtree
updated 4.4 years ago by
Guangchuang Yu
★ 2.6k • written 4.4 years ago by
jmah
▴ 30
0
votes
0
replies
699
views
stepwise time-dependent speciation decline vs diversity dependent decline without extinction
diversification
speciation
DDD
R
extinction
updated 4.5 years ago by
Biostar
20 • written 4.6 years ago by
jmah
▴ 30
0
votes
3
replies
2.3k
views
Chromvar for single cell ATAC seq
chromvar
single-cell ATAC-seq
ATAC-seq
updated 4.6 years ago by
Biostar
20 • written 5.4 years ago by
jmah
▴ 30
0
votes
9
replies
1.6k
views
Normalization across different single cell RNAseq experimetns
global-scaling
single-cell
scRNA-seq
batch-effect
updated 12 months ago by
Ram
45k • written 4.9 years ago by
jmah
▴ 30
1
vote
3
replies
1.8k
views
Does Chromvar require bulk ATAC-seq?
scATAC-seq
ATAC-seq
Chromvar
5.4 years ago by
jmah
▴ 30
2
votes
3
replies
1.5k
views
GO slimming to specific parent term
GO
gene ontology
slimming
parent
child
updated 5.7 years ago by
Jean-Karim Heriche
27k • written 5.7 years ago by
jmah
▴ 30
0
votes
0
replies
965
views
SSE for Kmodes
statistics
6.3 years ago by
jmah
▴ 30
1
vote
2
replies
1.9k
views
Cluster plots from categorical clustering
R
clustering
6.3 years ago by
jmah
▴ 30
4
votes
5
replies
3.1k
views
GO enrichment - interpreting broad terms
GO
gene ontology
updated 7.8 years ago by
Chirag Parsania
★ 2.0k • written 7.8 years ago by
jmah
▴ 30
3
votes
5
replies
3.3k
views
OrthoMCL step 12: [mclxReadDimensions] could not parse header
OrthoMCL
error
7.9 years ago by
jmah
▴ 30
0
votes
3
replies
1.2k
views
Looking for phylostratigraphy programs or protocols
sequence
blast
gene
8.0 years ago by
jmah
▴ 30
0
votes
2
replies
2.3k
views
Transcriptome assembly: Low GC, short contigs, low read alignment
RNA-Seq
GC content
troubleshooting
8.1 years ago by
jmah
▴ 30
1
vote
2
replies
5.7k
views
HMMER error: Unrecognized format with Pfam-A.hmm
HMMER
Pfam-A.hmm
error
8.4 years ago by
jmah
▴ 30
1
vote
2
replies
3.0k
views
FastQC contaminant line error
FastQC
contaminant
error
8.5 years ago by
jmah
▴ 30
3
votes
2
replies
1.8k
views
Limiting number of NCBI search results and downloading sequences
ncbi
search
8.6 years ago by
jmah
▴ 30
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