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Posts by dgrover6
Comment: C: Quantitative trait analysis
... Hi, Just curious his original query is for quantitative phenotypes (enzymatic activity), and matrix eQTL is an application for gene expression data containing thousands of transcripts. Do u think it is still applicable. Also, can u point where in plink 1.9 documentation is recommended the use of Mat ...
... According to stringtie manual, in the merge option: If the -G option (reference annotation) is provided, StringTie will assemble the transfrags from the input GTF files with the reference transcripts. It seems reference annotation is optional during merge. One way is to try without and see if yo ...
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