User: shai2go

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shai2go0
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Posts by shai2go

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Comment: C: General phylogenetic tree package
... @Jean-karim - thanks! ape is what i wanted, nj and mvr do the trick, but a little issue, i need to construct a tree assuming that let's say, if i get 1,2,3 there is a possibility of 1 being the father of 2,3 (that are brothers). nj and mvr give me a tree where all the samples are leaves, and no ...
written 13 months ago by shai2go0
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Comment: C: General phylogenetic tree package
... @medhat all the above are good for 1.inferring trees for genetic information 2.plotting trees that are allready made. i need to infer trees for data, that is not genetic, hence, i need to be able to create the distance matrix for it. i can't find any way to do so with what you posted... ...
written 13 months ago by shai2go0
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Comment: C: General phylogenetic tree package
... i am trying to construct phylogenetic tree for texts, so the format is somewhat more complex, a matrix of n*m, every matrix(i,j) is a word. i have a component that will calculate the distance beetween different entries of the matrix. i can reduce the words to vector of values and can calculate dis ...
written 13 months ago by shai2go0
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General phylogenetic tree package
... I am looking for a package that will allow me to use phylogenetic tree creation algorithms, with more general data than fasta format for genetic data. I found lots of packages but they require .fasta format and work for amino acids or nucleotides. I need to be able to define the traits of the dat ...
phylogenetic python tree R written 13 months ago by shai2go0 • updated 13 months ago by Jean-Karim Heriche13k

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