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Answer: Answer: Reuse MSA for multiple alphafold complex models?
10 months ago by massa.kassa.sc3na ▴ 590
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988
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Comment: Comment: Issues with using Entrez Direct discovery by navigation
15 months ago by massa.kassa.sc3na ▴ 590
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1
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988
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Comment: Comment: Issues with using Entrez Direct discovery by navigation
15 months ago by massa.kassa.sc3na ▴ 590
1
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1
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988
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Answer: Answer: Issues with using Entrez Direct discovery by navigation
15 months ago by massa.kassa.sc3na ▴ 590
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951
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Comment: Comment: How to solve "ModuleNotFoundError: No module named 'Bio'?"
18 months ago by massa.kassa.sc3na ▴ 590
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2.2k
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Comment: Comment: Error with scanpy package on Jupyter notebook
18 months ago by massa.kassa.sc3na ▴ 590
1
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1
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2.2k
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Comment: Comment: Error with scanpy package on Jupyter notebook
18 months ago by massa.kassa.sc3na ▴ 590
1
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1
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2.2k
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Answer: Answer: Error with scanpy package on Jupyter notebook
18 months ago by massa.kassa.sc3na ▴ 590
3
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1
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888
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Answer: Answer: please help :( ftp download from NCBI db is keep on being aborted during downloa
20 months ago by massa.kassa.sc3na ▴ 590
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0
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424
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Comment: Comment: Data extraction from blastn aligned hit
21 months ago by massa.kassa.sc3na ▴ 590
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407
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Comment: Comment: Finding RNA sequence profile for a set of proteins
22 months ago by massa.kassa.sc3na ▴ 590
4
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1
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3.0k
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Answer: Answer: Pandas issue: To write multiple csv in loop
22 months ago by massa.kassa.sc3na ▴ 590
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1.2k
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Comment: Comment: BlastX through Biopython
23 months ago by massa.kassa.sc3na ▴ 590
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1
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1.2k
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Comment: Comment: BlastX through Biopython
23 months ago by massa.kassa.sc3na ▴ 590
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1
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1.2k
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Comment: Comment: BlastX through Biopython
23 months ago by massa.kassa.sc3na ▴ 590
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1
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1.2k
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Comment: Comment: BlastX through Biopython
23 months ago by massa.kassa.sc3na ▴ 590
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1
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1.2k
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Comment: Comment: BlastX through Biopython
23 months ago by massa.kassa.sc3na ▴ 590
2
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1
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1.3k
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Answer: Answer: From GCA identifiers, download Genbank file format?
24 months ago by massa.kassa.sc3na ▴ 590
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0
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800
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Comment: Comment: How to work with a BAM file that have an inaccessible reference genome
24 months ago by massa.kassa.sc3na ▴ 590
0
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1
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1.3k
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Comment: Comment: Optimize a script that extract features from Fasta file using biopython
2.1 years ago by massa.kassa.sc3na ▴ 590
1
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1
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1.3k
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Comment: Comment: Optimize a script that extract features from Fasta file using biopython
2.1 years ago by massa.kassa.sc3na ▴ 590
1
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1
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1.3k
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Answer: Answer: Optimize a script that extract features from Fasta file using biopython
2.1 years ago by massa.kassa.sc3na ▴ 590
0
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0
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6.0k
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Comment: Comment: bigwig to wig conversion, getting bedgraph
2.2 years ago by massa.kassa.sc3na ▴ 590
1
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1
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447
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extract aligned reads to a sequence part and reset indices
samtools sam bam
updated 2.2 years ago by 161k • written 2.2 years ago by ▴ 590
1
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926
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Comment: Comment: Difference between LIGR-seq and PARIS methods
2.2 years ago by massa.kassa.sc3na ▴ 590
3
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2
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926
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Difference between LIGR-seq and PARIS methods
RNA
2.2 years ago by massa.kassa.sc3na ▴ 590
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0
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1.1k
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Comment: Comment: How do I install APT-MIDAS on linux command line?
2.2 years ago by massa.kassa.sc3na ▴ 590
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1
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1.1k
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Comment: Comment: How do I install APT-MIDAS on linux command line?
2.2 years ago by massa.kassa.sc3na ▴ 590
0
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1
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1.1k
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Comment: Comment: How do I install APT-MIDAS on linux command line?
2.2 years ago by massa.kassa.sc3na ▴ 590
0
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1
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1.1k
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Comment: Comment: How do I install APT-MIDAS on linux command line?
2.2 years ago by massa.kassa.sc3na ▴ 590
6
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5
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1.2k
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6 follow
Forum: Usability of depiction of individual reads in genome browser visualization
visualization browser genome
updated 2.3 years ago by 100k • written 2.3 years ago by ▴ 590
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522
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Answer: Answer: BLAST Annotating Sub-sequences of Features with Not Normalized Identity Scores
2.6 years ago by massa.kassa.sc3na ▴ 590
3
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1
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6.8k
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Answer: Answer: Can't locate Bio/SeqIO.pm - path error?
2.6 years ago by massa.kassa.sc3na ▴ 590
1
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1
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814
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Comment: Comment: Batch verify hairpin structure
2.8 years ago by massa.kassa.sc3na ▴ 590
0
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0
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712
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Comment: Comment: Snakemake error with blast
2.8 years ago by massa.kassa.sc3na ▴ 590
0
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1
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1.3k
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Comment: Comment: ClustalW using Biopython
2.8 years ago by massa.kassa.sc3na ▴ 590
0
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0
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657
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Comment: Comment: defining input files for SeqIO
2.8 years ago by massa.kassa.sc3na ▴ 590
0
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1
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1.8k
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Comment: Comment: Blast 2.11 not blasting all sequences in a file?
2.8 years ago by massa.kassa.sc3na ▴ 590
0
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0
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489
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MSA - optimize prealigned sequences - limit number of introduced gaps
MSA
3.0 years ago by massa.kassa.sc3na ▴ 590
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1
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2.4k
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Comment: C: Double Digest through Regular Expression in python
3.4 years ago by massa.kassa.sc3na ▴ 590
2
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0
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768
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Answer: C: Could you explain what that means?
3.4 years ago by massa.kassa.sc3na ▴ 590
0
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0
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3.3k
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Comment: C: Extracting CDS using python
3.4 years ago by massa.kassa.sc3na ▴ 590
1
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1
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3.3k
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Comment: C: Extracting CDS using python
3.4 years ago by massa.kassa.sc3na ▴ 590
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1
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3.3k
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Comment: C: Extracting CDS using python
3.4 years ago by massa.kassa.sc3na ▴ 590
2
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1
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1.6k
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Answer: C: Building a BLAST database with the python subprocess module
3.4 years ago by massa.kassa.sc3na ▴ 590
2
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1
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2.3k
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Answer: C: Joining multiple query keys in entrez Efetch
3.4 years ago by massa.kassa.sc3na ▴ 590
0
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0
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666
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Comment: C: Blast output representation
3.6 years ago by massa.kassa.sc3na ▴ 590
3
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2
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3.4k
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Difference between "nucleotide" and "nuccore" entrez databases
entrez ncbi
updated 3.1 years ago by ★ 1.3k • written 3.7 years ago by ▴ 590
1
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1
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3.0k
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Comment: C: How to use entrezpy and Biopython Entrez libraries to access ClinVar data from
3.7 years ago by massa.kassa.sc3na ▴ 590
0
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1
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3.0k
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Comment: C: How to use entrezpy and Biopython Entrez libraries to access ClinVar data from
3.7 years ago by massa.kassa.sc3na ▴ 590
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