User: saranpons3

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saranpons350
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Posts by saranpons3

<prev • 68 results • page 1 of 7 • next >
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Comment: C: How many A's ,T's , C's and G's in homo sapiens3 reads data set?
... May i know that what do you mean by we have to work with what is available now? ...
written 6 weeks ago by saranpons350
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Comment: C: How many A's ,T's , C's and G's in homo sapiens3 reads data set?
... Thanks for the reply ...
written 6 weeks ago by saranpons350
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Comment: C: How many A's ,T's , C's and G's in homo sapiens3 reads data set?
... I know that A, T, C, G and N can be there in the reads of FASTQ and FASTA files. But, why your result has B, K, M, N, R, S, W and Y? Do reads from reads data set have alphabets other than A, T, C, G and N? ...
written 6 weeks ago by saranpons350
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Comment: C: How many A's ,T's , C's and G's in homo sapiens3 reads data set?
... Thanks for your answer ...
written 6 weeks ago by saranpons350
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Comment: A: How many A's ,T's , C's and G's in homo sapiens3 reads data set?
... Hello all, When I looked at the numbers in every experiment's output, I could see that A and T are appearing more frequently when compared with C and G. **So, Can i say that Human genome will have more A's and T's rather than C and G??!!** ...
written 6 weeks ago by saranpons350
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Comment: C: How many A's ,T's , C's and G's in homo sapiens3 reads data set?
... I am asking generally how many A's, T's, C's and G's are there in human genome? Which nucleotides is more in human genome? ...
written 7 weeks ago by saranpons350
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How many A's ,T's , C's and G's in homo sapiens3 reads data set?
... Hello, I would like to know that How many A's ,T's , C's and G's are there in homo sapiens3 reads data set of 1.8TB data set. Do we have any tool to find this? Generally in Genome of human beings, which nucleotides count is more? thanks. ...
genome written 7 weeks ago by saranpons350
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Comment: C: Guidelines to choose K-mer size for De bruijn graph based assembly (2nd generati
... Dear h.mon, Dataset is not preprocessed already. What should be the k-mer size depends on the assembler? If so, as of now I have velvet installed in my computer.So, i will use velvet assembler. ...
written 3 months ago by saranpons350
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Guidelines to choose K-mer size for De bruijn graph based assembly (2nd generation sequencing reads)?
... Hello members, I would like to know that is there any guidelines to choose K-mer size for Debruijn graph based assembly (2nd generation sequencing reads). I have F.vesca data set in which total number of reads is 12803137 and on an average length of each read is 353 bp. So, I would like to know that ...
k-mer de bruijn graph written 3 months ago by saranpons350 • updated 3 months ago by h.mon10k
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Comment: C: Where i can find sequencing reads(3rd generation sequencing) data set in which e
... Thanks for your answer. I'll get back to you if I have other questions related to this. ...
written 5 months ago by saranpons350

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