Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : answers
2
votes
2
replies
739
views
Answer: Answer: Chipseq visualization how to draw the figure
19 months ago by Chirag Nepal ★ 2.3k
4
votes
1
reply
6.7k
views
Answer: A: How to find CpG island shore?
updated 3.2 years ago by 38k • written 8.8 years ago by ★ 2.3k
1
vote
1
reply
1.6k
views
Answer: A: Identify miRNA from deep RNA sequencing
updated 3.2 years ago by 38k • written 7.2 years ago by ★ 2.3k
1
vote
0
replies
4.9k
views
Answer: A: FastQC of small rna-seq
updated 3.3 years ago by 38k • written 7.2 years ago by ★ 2.3k
0
votes
0
replies
2.0k
views
Answer: A: Finding uORFs in non-model organisms
updated 3.3 years ago by 38k • written 7.2 years ago by ★ 2.3k
0
votes
0
replies
2.2k
views
Answer: A: need to identify CDS (translation) for gene models predicted by Cufflinks and St
updated 3.3 years ago by 38k • written 7.2 years ago by ★ 2.3k
4
votes
1
reply
2.6k
views
Answer: A: CAGE processing (from BAM to expression values per Gene/Isoform)
updated 3.3 years ago by 38k • written 7.2 years ago by ★ 2.3k
1
vote
1
reply
4.1k
views
Answer: A: promoter position estimation
updated 3.3 years ago by 38k • written 7.3 years ago by ★ 2.3k
0
votes
0
replies
1.9k
views
Answer: A: Why there are some genes have a same transcription start position?
updated 3.3 years ago by 38k • written 7.3 years ago by ★ 2.3k
1
vote
1
reply
2.8k
views
Answer: A: ChIP-seq blacklisted regions (mouse)
updated 3.3 years ago by 38k • written 7.4 years ago by ★ 2.3k
0
votes
1
reply
1.6k
views
Answer: A: Edit distance between microRNAs
updated 3.5 years ago by 38k • written 8.7 years ago by ★ 2.3k
8
votes
1
reply
3.0k
views
Answer: A: enhancer RNA counting from RNASeq data
5.1 years ago by Chirag Nepal ★ 2.3k
3
votes
1
reply
9.2k
views
Answer: A: How to get promoter coordinates of hg19 from UCSC genome browser ?
5.9 years ago by Chirag Nepal ★ 2.3k
1
vote
0
replies
1.3k
views
Answer: A: Detecting non-exonic conserved regions
6.3 years ago by Chirag Nepal ★ 2.3k
3
votes
0
replies
1.3k
views
Answer: A: Publishing and research fees
6.3 years ago by Chirag Nepal ★ 2.3k
1
vote
0
replies
1.7k
views
Answer: A: identification of miRNA for zebrafish genes
6.4 years ago by Chirag Nepal ★ 2.3k
3
votes
1
reply
1.8k
views
Answer: A: Finding Ultraconserved elements between human and zebrafish
6.5 years ago by Chirag Nepal ★ 2.3k
0
votes
1
reply
2.1k
views
Answer: A: How to visualize read depth based on genomic location
6.5 years ago by Chirag Nepal ★ 2.3k
1
vote
0
replies
1.2k
views
Answer: A: lncRNA annoatation in common crap
6.6 years ago by Chirag Nepal ★ 2.3k
2
votes
1
reply
5.8k
views
Answer: A: Copy Number Variation Steps (CNVs) - detection step by step
6.7 years ago by Chirag Nepal ★ 2.3k
0
votes
1
reply
1.1k
views
Answer: A: microRNA visulaization data track
6.9 years ago by Chirag Nepal ★ 2.3k
1
vote
2
replies
9.5k
views
Answer: A: 3' Bias in RNASEQ data
6.9 years ago by Chirag Nepal ★ 2.3k
0
votes
0
replies
2.9k
views
Answer: A: I wish to compare one particular gene of the species with that of other species
6.9 years ago by Chirag Nepal ★ 2.3k
6
votes
0
replies
3.0k
views
Answer: A: help with career decisions: should a PhD in genetics go for another master in bi
6.9 years ago by Chirag Nepal ★ 2.3k
5
votes
0
replies
3.8k
views
Answer: A: Europe: Non-Paid Bioinformatics Internships/Training
6.9 years ago by Chirag Nepal ★ 2.3k
1
vote
0
replies
1.3k
views
Answer: A: reads from miRNA-seq
6.9 years ago by Chirag Nepal ★ 2.3k
1
vote
1
reply
1.6k
views
Answer: A: nearby gene and miRNA of non coding RNA
6.9 years ago by Chirag Nepal ★ 2.3k
0
votes
0
replies
1.5k
views
Answer: A: Two UCSC bedgraph tracks next to each other
7.0 years ago by Chirag Nepal ★ 2.3k
1
vote
1
reply
3.1k
views
Answer: A: Gene Ontology without enrichment analysis
7.0 years ago by Chirag Nepal ★ 2.3k
2
votes
1
reply
43k
views
Answer: A: Visualization of ChIP-seq data using Heatmaps
7.0 years ago by Chirag Nepal ★ 2.3k
1
vote
0
replies
2.3k
views
Answer: A: CpG island identification
7.0 years ago by Chirag Nepal ★ 2.3k
0
votes
0
replies
1.6k
views
Answer: A: Score bit in multiple BLAST
7.0 years ago by Chirag Nepal ★ 2.3k
2
votes
2
replies
4.7k
views
Answer: A: H3K4Me3 ChIP-Seq signal at promoter
7.3 years ago by Chirag Nepal ★ 2.3k
0
votes
1
reply
2.6k
views
Answer: A: all the SV type of breakdancer output are ITX is that correct?
7.3 years ago by Chirag Nepal ★ 2.3k
0
votes
1
reply
3.8k
views
Answer: Answer: Copy number variation from BAM and VCF files?
updated 7 months ago by 38k • written 7.4 years ago by ★ 2.3k
0
votes
0
replies
1.5k
views
Answer: A: microRNAseq data: is this normal or weird?
7.4 years ago by Chirag Nepal ★ 2.3k
0
votes
1
reply
5.8k
views
Answer: Answer: Many overrepresented sequences in RNA-seq data. Should them be trimmed out?
updated 6 months ago by 38k • written 7.5 years ago by ★ 2.3k
0
votes
0
replies
5.4k
views
Answer: Answer: BI Journals with at least 3-4 impact factor
updated 14 months ago by 38k • written 7.5 years ago by ★ 2.3k
1
vote
1
reply
4.3k
views
Answer: Answer: H3K4me3 and H3K27ac double peaks near TSS
updated 6 months ago by 38k • written 7.5 years ago by ★ 2.3k
0
votes
1
reply
1.9k
views
Answer: A: Question about mutation spectrum
7.6 years ago by Chirag Nepal ★ 2.3k
0
votes
0
replies
1.8k
views
Answer: A: What is the best human 3'-UTR annotation?
7.6 years ago by Chirag Nepal ★ 2.3k
6
votes
1
reply
5.5k
views
Answer: Answer: How can CAGE and RNA-Seq data complement each other?
updated 5 months ago by 38k • written 7.6 years ago by ★ 2.3k
4
votes
1
reply
6.6k
views
Answer: A: How can we make this plot?
7.7 years ago by Chirag Nepal ★ 2.3k
2
votes
2
replies
2.4k
views
Answer: Answer: BedTools options - Overlap exons for various bed files
updated 3 months ago by 38k • written 7.8 years ago by ★ 2.3k
2
votes
0
replies
3.7k
views
Answer: Answer: Can I ignore somatic mutations that are also in dbSNP when analyzing cancer-rela
updated 11 weeks ago by 38k • written 7.8 years ago by ★ 2.3k
0
votes
0
replies
3.5k
views
Answer: Answer: any tutorials for structural variants filtering and prioritization
updated 10 months ago by 38k • written 7.9 years ago by ★ 2.3k
2
votes
0
replies
3.7k
views
Answer: Answer: Chip-seq reads' trimming
updated 9 months ago by 38k • written 8.0 years ago by ★ 2.3k
0
votes
0
replies
5.4k
views
Answer: A: Why is the cds start and cds end position the same in some of the known-gene dat
8.1 years ago by Chirag Nepal ★ 2.3k
0
votes
1
reply
4.9k
views
Answer: Answer: Read count per exon per transcript
updated 10 months ago by 38k • written 8.1 years ago by ★ 2.3k
0
votes
0
replies
2.3k
views
Answer: Answer: count reference and alllele frequency from exome-seq bam
updated 11 months ago by 38k • written 8.1 years ago by ★ 2.3k
80 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6