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Comment: Comment: Visualization of ChIP-seq data using Heatmaps (Updated: 06/10/16)
19 months ago by Chirag Nepal ★ 2.3k
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0
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1.6k
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Comment: C: counting number of CpGs that are methylated and unmethylated in a read of whole
2.4 years ago by Chirag Nepal ★ 2.3k
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0
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38k
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Comment: C: Bam File: Change Chromosome Notation
updated 2.6 years ago by 38k • written 7.5 years ago by ★ 2.3k
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1
reply
775
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Comment: C: Find HBV integration sites in human genome.
3.0 years ago by Chirag Nepal ★ 2.3k
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0
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547
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Comment: C: Mapping reads on ENCODEBlackListedRegion
3.0 years ago by Chirag Nepal ★ 2.3k
1
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0
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47k
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Comment: C: Adding Read Groups To Bam Files
updated 3.0 years ago by 38k • written 8.4 years ago by ★ 2.3k
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0
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904
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Comment: C: Visualize paired end reads
3.1 years ago by Chirag Nepal ★ 2.3k
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0
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13k
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Comment: C: Visualize Strand-Specific Rna-Seq : How To Differentiate Strands
updated 3.2 years ago by 38k • written 7.2 years ago by ★ 2.3k
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0
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1.7k
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Comment: C: How should I interpret these pairs of mapped CAGE reads differing in position by
updated 3.2 years ago by 38k • written 7.2 years ago by ★ 2.3k
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0
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2.1k
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Comment: C: Is the expression value of miRNA precursore is equivalent to it's corresponding
updated 3.2 years ago by 38k • written 8.9 years ago by ★ 2.3k
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1
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13k
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Comment: C: Plotting Reads Around Tss
updated 3.3 years ago by 38k • written 8.6 years ago by ★ 2.3k
1
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1
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4.1k
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Comment: C: promoter position estimation
updated 3.3 years ago by 38k • written 7.3 years ago by ★ 2.3k
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1
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2.1k
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Comment: C: Position of SNPs with respect to codon
updated 3.3 years ago by 38k • written 7.3 years ago by ★ 2.3k
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1
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7.1k
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Comment: C: Data Set Suitable For Comparing Wgs, Exome, And Rna-Seq Data Generated From The
updated 3.3 years ago by 38k • written 8.5 years ago by ★ 2.3k
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0
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3.0k
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Comment: C: Plotting Coverage - Strand specification
updated 3.3 years ago by 38k • written 7.3 years ago by ★ 2.3k
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1
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9.8k
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Comment: C: Extracting from tophat outputs reads pairs and splice-junctions with a single be
updated 3.3 years ago by 38k • written 7.4 years ago by ★ 2.3k
0
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1
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9.8k
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Comment: C: Extracting from tophat outputs reads pairs and splice-junctions with a single be
updated 3.3 years ago by 38k • written 7.4 years ago by ★ 2.3k
0
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1
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9.8k
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Comment: C: Extracting from tophat outputs reads pairs and splice-junctions with a single be
updated 3.3 years ago by 38k • written 7.4 years ago by ★ 2.3k
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0
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3.9k
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Comment: C: What causes tophat_reports error?
updated 3.3 years ago by 38k • written 7.4 years ago by ★ 2.3k
0
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1
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2.5k
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Comment: C: breakdancer - cfg creation and chi square problem
updated 3.3 years ago by 38k • written 7.4 years ago by ★ 2.3k
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1
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43k
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Comment: A: Any Method Of Converting Bigwig File Format Into Bed Format?
updated 3.4 years ago by 38k • written 9.7 years ago by ★ 2.3k
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0
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24k
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Comment: C: GATK, SAM file doesn't have any read groups defined in the header
updated 3.4 years ago by 38k • written 8.4 years ago by ★ 2.3k
0
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1
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24k
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Comment: C: GATK, SAM file doesn't have any read groups defined in the header
updated 3.4 years ago by 38k • written 8.4 years ago by ★ 2.3k
0
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1
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24k
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Comment: C: GATK, SAM file doesn't have any read groups defined in the header
updated 3.4 years ago by 38k • written 8.4 years ago by ★ 2.3k
0
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1
reply
3.2k
views
Comment: C: Varscan somatic error
updated 3.5 years ago by 38k • written 8.6 years ago by ★ 2.3k
0
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1
reply
3.2k
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Comment: C: Varscan somatic error
updated 3.5 years ago by 38k • written 8.6 years ago by ★ 2.3k
1
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0
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2.3k
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Comment: C: Can we combine adjacent peaks in ATAC-Seq fata
3.8 years ago by Chirag Nepal ★ 2.3k
0
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0
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29k
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Comment: C: Drug to Target/Gene/Protein Interaction Databases
4.2 years ago by Chirag Nepal ★ 2.3k
0
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0
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1.2k
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Comment: C: Identifying pri-microRNA sequence from microRNA sequence
4.3 years ago by Chirag Nepal ★ 2.3k
0
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1
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2.1k
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Comment: C: How to merge chr+strand+coordinate+score from multiple files?
4.8 years ago by Chirag Nepal ★ 2.3k
0
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0
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864
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Comment: C: Identifying ago2 enriched genes under 2 different conditions
4.9 years ago by Chirag Nepal ★ 2.3k
0
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0
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15k
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Comment: C: Installation of the MuSiC suite on unsupported Linux distributions
4.9 years ago by Chirag Nepal ★ 2.3k
0
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1
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1.3k
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Comment: C: Tophat2 error: failed to retrieve right/left read for pair
4.9 years ago by Chirag Nepal ★ 2.3k
2
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1
reply
1.7k
views
Comment: A: Tophat not installing with Biostar Handbook
5.0 years ago by Chirag Nepal ★ 2.3k
0
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1
reply
1.4k
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Comment: C: How to determine high-quality somatic mutations
5.0 years ago by Chirag Nepal ★ 2.3k
0
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1
reply
2.5k
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Comment: C: Finding zebrafish promoters ENSEMBL
5.1 years ago by Chirag Nepal ★ 2.3k
0
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0
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8.3k
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Comment: C: Small RNA sequence, how to calculate read counts? What's the criterion? Is there
5.1 years ago by Chirag Nepal ★ 2.3k
0
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1
reply
5.5k
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Comment: C: Best/right way to quantify small RNA transcripts
5.1 years ago by Chirag Nepal ★ 2.3k
0
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1
reply
8.3k
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Comment: C: Small RNA sequence, how to calculate read counts? What's the criterion? Is there
5.1 years ago by Chirag Nepal ★ 2.3k
0
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0
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3.3k
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Comment: C: about somatic mutation calling
5.1 years ago by Chirag Nepal ★ 2.3k
0
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1
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3.3k
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Comment: C: about somatic mutation calling
5.1 years ago by Chirag Nepal ★ 2.3k
1
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1
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3.3k
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Comment: C: about somatic mutation calling
5.1 years ago by Chirag Nepal ★ 2.3k
0
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2
replies
3.3k
views
Comment: C: about somatic mutation calling
5.1 years ago by Chirag Nepal ★ 2.3k
0
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1
reply
3.3k
views
Comment: C: about somatic mutation calling
5.1 years ago by Chirag Nepal ★ 2.3k
0
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1
reply
3.3k
views
Comment: C: about somatic mutation calling
5.1 years ago by Chirag Nepal ★ 2.3k
1
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1
reply
1.2k
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Comment: C: Excised exon or transcribed snoRNA?
5.3 years ago by Chirag Nepal ★ 2.3k
0
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0
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2.8k
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Comment: C: Uniquely mapped in Human
5.5 years ago by Chirag Nepal ★ 2.3k
0
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0
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1.4k
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Comment: C: Virus sequence detected in my RNA-seq reads
5.6 years ago by Chirag Nepal ★ 2.3k
1
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0
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2.1k
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Comment: C: miRNA identification from RNA seq data
5.6 years ago by Chirag Nepal ★ 2.3k
0
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0
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1.3k
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Comment: C: What is the recommended sequencing depth for ChIRP-seq?
5.7 years ago by Chirag Nepal ★ 2.3k
175 results • Page 1 of 4
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