User: inaciogmedeiros
inaciogmedeiros • 10
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- 3 years ago
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Posts by inaciogmedeiros
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... Do you know where is possible to find a version of hg19 or hg38 with masked endogenous viral sequences? ...
written 5 weeks ago by
inaciogmedeiros • 10
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... Tutorial available in following link:
https://medium.com/@boyinacio/hacking-quast-and-changing-minimum-allowed-identity-percentage-setting-c89ef30418cb ...
written 13 months ago by
inaciogmedeiros • 10
• updated
13 months ago by
h.mon ♦ 27k
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... In a collaborative work, we've generated a profile file from an functional analysis performed in [SUPERFOCUS][1], but when we've put it in STAMP, an error message appeared saying that a value in one column had more than one "parent" in previous columns. [Something like that][2]
According to STAMP, ...
written 18 months ago by
inaciogmedeiros • 10
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... I've run SCRATCH Suite (SSPro, ACCPro), downloaded from [here][1], but an error message is displayed saying that SCRATCH did not found file "dataset.pro", although directory in which this file should be is created, and has user permissions for accessing.
Does anyone know how to solve this problem?
...
written 18 months ago by
inaciogmedeiros • 10
• updated
3 months ago by
sofimukhtar1 • 0
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... Hi folks. Since then, I've redirected my activities to other branches, although I'm expecting to return to HHPred soon.
I'm gonna check if there's a bin directory, and hope that HHPred has been released new stable versions available for download (last time it was a beta version). ...
written 23 months ago by
inaciogmedeiros • 10
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... -rw-r--r--. 1 inacio binfo 3,6K Set 28 11:49 /data/home/inacio/V3/missions/reproduce_pipeline_of_wyndemberg/sample_a_trimmed_fastx_trimmer_result.fastq
...
written 2.0 years ago by
inaciogmedeiros • 10
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1.2k
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... Command I've posted was a "model" of how I'm using SPAdes (I've ended up forgetting to adapt error message, sorry). ...
written 2.1 years ago by
inaciogmedeiros • 10
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1.2k
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... spades script is also being called via absolute path, from another external path from spades. ...
written 2.1 years ago by
inaciogmedeiros • 10
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1
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1.2k
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... An additional detail: argument for `--s1` is a absolute path for input.fastq. Does this make any substantial difference? ...
written 2.1 years ago by
inaciogmedeiros • 10
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... Same error is still occuring. ...
written 2.1 years ago by
inaciogmedeiros • 10
Latest awards to inaciogmedeiros
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13 months ago,
created a question with more than 1,000 views.
For Can I specify on BLAST (blastp, specifically) the length of subject sequences to align with?
Popular Question
13 months ago,
created a question with more than 1,000 views.
For Doubt about specifying options in SPAdes
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For How to set hhm_db and a3m_db for HHPRED?
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