User: bekahlee54

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bekahlee540
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Posts by bekahlee54

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Comment: C: Trim_galore error: quality_trim_index()
... Updating the python version solved the problem. ...
written 3 months ago by bekahlee540
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NGSadmix program returns -nan as a result for the admixture proportions of each individual
... I have been trying to run the program NGSadmix (http://www.popgen.dk/software/index.php/NgsAdmix) using nine whole genome sequences. The program will run, however, the output in my .fopt.gz and .qopt files only contain -nan in both columns (running a k=2). I made a beagle input file using the angsd ...
genome software error angsd ngsadmix written 3 months ago by bekahlee540 • updated 3 months ago by andersdetermig20
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Trim_galore error: quality_trim_index()
... I am running trim-galore on a computing cluster and would like to remove adapters from my sequences. I downloaded and installed the cutadapt package for this task. The following is the line of code I'm using for trimming: ./trim_galore -q 30 --illumina -o /work/bekhorn/Trimmed/ --gzip --paire ...
cutadapt next-gen trim_galore sequencing written 20 months ago by bekahlee540 • updated 20 months ago by genomax49k

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