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366
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building large dataset transcriptome
de-novo transcriptome
updated 7 months ago by 146k • written 7 months ago by ★ 1.4k
0
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1
reply
369
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Resolution of ambiguous calls in germline vcf
vcfs germline qc
updated 7 months ago by 22k • written 7 months ago by ★ 1.4k
0
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0
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3.4k
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Comment: Comment: Split plink files by a number of SNPs
12 months ago by Raygozak ★ 1.4k
0
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0
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6.9k
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Answer: Answer: "bowtie2 died with signal 9 (KILL)" error message, having trouble figuring out h
18 months ago by Raygozak ★ 1.4k
0
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1
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2.1k
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Comment: Comment: Nextflow rnaseq finishing early
18 months ago by Raygozak ★ 1.4k
0
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1
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2.1k
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Comment: Comment: Nextflow rnaseq finishing early
18 months ago by Raygozak ★ 1.4k
7
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7
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2.1k
views
Nextflow rnaseq finishing early
RNA-seq nextflow
updated 18 months ago by 44k • written 18 months ago by ★ 1.4k
0
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1
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1.8k
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Comment: Comment: Run nextflow sections sequentially
19 months ago by Raygozak ★ 1.4k
17
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8
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1.8k
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Run nextflow sections sequentially
nextflow
updated 10 months ago by 44k • written 19 months ago by ★ 1.4k
0
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2
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1.8k
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Comment: Comment: Run nextflow sections sequentially
19 months ago by Raygozak ★ 1.4k
0
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0
replies
1.3k
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Comment: Comment: Bowtie2-build not working
22 months ago by Raygozak ★ 1.4k
0
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0
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1.3k
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Comment: Comment: Bowtie2-build not working
22 months ago by Raygozak ★ 1.4k
1
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4
replies
1.3k
views
Bowtie2-build not working
bowtie2-buid index
22 months ago by Raygozak ★ 1.4k
1
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1
reply
1.3k
views
Answer: Answer: Bowtie2-build not working
22 months ago by Raygozak ★ 1.4k
1
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0
replies
689
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working with .sra-lite files
ncbi fastq prefetch
2.0 years ago by Raygozak ★ 1.4k
0
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1
reply
543
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Masking or deduplication tool
deduplication masking fasta
updated 2.1 years ago by 146k • written 2.1 years ago by ★ 1.4k
0
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0
replies
380
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rpoB database for microbiome
rpob taxonomy microbiome
2.1 years ago by Raygozak ★ 1.4k
0
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0
replies
1.5k
views
Comment: Comment: whole genome sequence for origami 2 (DE3) and rosetta 2 (DE3)
2.8 years ago by Raygozak ★ 1.4k
1
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1
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3.1k
views
Answer: A: Better way for speedup of Humann3 metagenomics analysis pipeline?
3.7 years ago by Raygozak ★ 1.4k
3
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0
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7.0k
views
Answer: A: Pindel And Mac Os X
updated 4.8 years ago by 44k • written 11.6 years ago by ★ 1.4k
1
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0
replies
745
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Comment: C: CYP2C19 variants with asterisk
4.9 years ago by Raygozak ★ 1.4k
0
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0
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4.2k
views
Comment: C: Pipeline Pilot Vs. Galaxy For Nextgen Data Analysis
updated 5.0 years ago by 44k • written 12.6 years ago by ★ 1.4k
6
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0
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15k
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Answer: A: Best Graphics Gallery Or Blogs For Bioinformatics Use
updated 5.1 years ago by 44k • written 12.6 years ago by ★ 1.4k
2
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0
replies
26k
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Answer: A: Visualizing K Mean Clustering Results
updated 5.1 years ago by 44k • written 12.8 years ago by ★ 1.4k
0
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0
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15k
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Comment: C: Is Position In Vcf File 1-Based (First Index Is At 1 Not 0)?
5.1 years ago by Raygozak ★ 1.4k
15
votes
1
reply
14k
views
Coverage Calculation
next-gen coverage
updated 5.5 years ago by 20 • written 11.9 years ago by ★ 1.4k
0
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1
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2.9k
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Comment: C: GWAS principal components
5.7 years ago by Raygozak ★ 1.4k
1
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3
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2.9k
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GWAS principal components
gwas principal-components
5.7 years ago by Raygozak ★ 1.4k
1
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0
replies
2.2k
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Comment: C: Non -mathematical explanation of what "HMM" does (eg in GenScan)
6.0 years ago by Raygozak ★ 1.4k
2
votes
2
replies
1.3k
views
SRA data reuse policy
ethics data-sharing sra
6.0 years ago by Raygozak ★ 1.4k
0
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0
replies
5.7k
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Comment: C: XMFA to MAF
6.5 years ago by Raygozak ★ 1.4k
7
votes
4
replies
2.2k
views
NGS alignment image drawing
bam ngs
updated 2.2 years ago by 44k • written 8.7 years ago by ★ 1.4k
7
votes
12
replies
7.0k
views
7 follow
Pindel And Mac Os X
pindel
updated 2.7 years ago by 44k • written 11.8 years ago by ★ 1.4k
3
votes
5
replies
14k
views
Adding Missing Atoms To Pdb
pdb structure protein
updated 8.6 years ago by • 0 • written 12.0 years ago by ★ 1.4k
3
votes
2
replies
1.6k
views
Assemble small set of reads
Assembly
updated 2.3 years ago by 44k • written 8.6 years ago by ★ 1.4k
0
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1
reply
1.9k
views
NCBI online blast number of hits
ncbi blast
updated 2.3 years ago by 44k • written 8.7 years ago by ★ 1.4k
0
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0
replies
1.3k
views
Cufflinks output verification
cufflinks
updated 2.3 years ago by 44k • written 8.7 years ago by ★ 1.4k
1
vote
1
reply
2.9k
views
Cufflinks/Cuffdiff Multiple conditions
RNA-Seq Cufflinks
updated 2.2 years ago by 44k • written 8.7 years ago by ★ 1.4k
4
votes
4
replies
3.2k
views
Chicken Specific Database
gene pathway database
updated 9.0 years ago by 20 • written 12.1 years ago by ★ 1.4k
0
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0
replies
1.9k
views
Answer: Answer: Rnaseq calibration dataset
updated 2.1 years ago by 44k • written 9.1 years ago by ★ 1.4k
1
vote
2
replies
1.9k
views
Rnaseq calibration dataset
RNA-Seq dataset
updated 2.1 years ago by 44k • written 9.1 years ago by ★ 1.4k
0
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0
replies
63k
views
Comment: C: How To Efficiently Parse A Huge Fastq File?
10.1 years ago by Raygozak ★ 1.4k
0
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0
replies
2.8k
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Comment: C: Artificial Sequences in ncbi
10.2 years ago by Raygozak ★ 1.4k
0
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3
replies
2.8k
views
Artificial Sequences in ncbi
ftp-site ncbi gbk
updated 2.9 years ago by 44k • written 10.2 years ago by ★ 1.4k
1
vote
3
replies
2.9k
views
Updating Genome Annotation In Ncbi
genome ncbi annotation
updated 10.3 years ago by 164k • written 11.4 years ago by ★ 1.4k
2
votes
3
replies
3.4k
views
Srr File Format
microarray gene geo bioconductor
updated 10.5 years ago by 20 • written 12.9 years ago by ★ 1.4k
0
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1
reply
3.1k
views
Comment: C: BioPython error parsing standard GenBank file
10.5 years ago by Raygozak ★ 1.4k
0
votes
1
reply
2.0k
views
Bustard Quality Score
sra quality conversion
updated 10.5 years ago by 20 • written 12.9 years ago by ★ 1.4k
3
votes
5
replies
8.2k
views
Masurca Error With Illumina Assembly
denovo illumina
updated 10.6 years ago by ▴ 190 • written 11.4 years ago by ★ 1.4k
0
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1
reply
2.6k
views
Comment: C: Unextractible Embl Features For Seqio.Parse
10.6 years ago by Raygozak ★ 1.4k
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