User: wclee47

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wclee470
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Ploidy vs. copy number in Sequenza
... Hi, I ran Sequenza for one tumor sample with the matched normal control. I obtained purity 0.9 and ploidy 3 for the tumor. When I saw the chromosome plots, I found that regions showing depth ratio close to 1 were set to copy number 3. In my understanding, copy numbers for depth ratio 1 should be 2 ...
ploidy copy number sequenza depth ratio written 2.5 years ago by wclee470 • updated 2.5 years ago by favero.francesco120

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