User: thestaroceanster

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Posts by thestaroceanster

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Comment: C: SomaticSniper: Depth of reads supporting variant(s) in normal =0
... I double check the input file and read the specific location with bam2R in deepSNV package. There are variant reads in normal tissue with quality above threshold. ...
written 9 weeks ago by thestaroceanster0
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SomaticSniper: Depth of reads supporting variant(s) in normal =0
... When using somaticsniper for somatic mutations detection, the result showed that nearly all mutations identified by somaticsniper have Depth of reads supporting variant(s) in normal equal to 0. But when I double check the vcf file provided by the same command, it seems that there is actually some r ...
somaticsniper written 12 weeks ago by thestaroceanster0

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