Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
2.2k
views
Comment: C: how to plot lollipop in which dots show mean/median for each variable?
4.2 years ago by Raheleh ▴ 260
0
votes
1
reply
2.2k
views
Comment: C: how to plot lollipop in which dots show mean/median for each variable?
4.2 years ago by Raheleh ▴ 260
0
votes
1
reply
2.2k
views
Comment: C: how to plot lollipop in which dots show mean/median for each variable?
4.2 years ago by Raheleh ▴ 260
2
votes
14
replies
2.2k
views
how to plot lollipop in which dots show mean/median for each variable?
lollipop plot ggplot2
updated 4.2 years ago by 10k • written 4.2 years ago by ▴ 260
1
vote
3
replies
2.6k
views
What should be reported as Hazard Ratio in Kaplan Meier curve?
survival Hazard Ratio kaplan meier
updated 4.2 years ago by ▴ 10 • written 4.3 years ago by ▴ 260
0
votes
1
reply
5.5k
views
Comment: A: RIP-Seq data analysis
4.3 years ago by Raheleh ▴ 260
0
votes
0
replies
880
views
Prediction Analysis for Microarrays (PAM) method can be used for RNAseq data?
PAMR RNAseq prediction
4.3 years ago by Raheleh ▴ 260
0
votes
0
replies
844
views
Comment: C: Best statistical test to compare the performance of small classifiers?
4.3 years ago by Raheleh ▴ 260
0
votes
1
reply
844
views
Comment: C: Best statistical test to compare the performance of small classifiers?
4.3 years ago by Raheleh ▴ 260
1
vote
4
replies
844
views
Best statistical test to compare the performance of small classifiers?
Statistical test classifier Fisher's exact test
updated 4.3 years ago by 87k • written 4.4 years ago by ▴ 260
2
votes
1
reply
785
views
Pathway enrichment analysis for a small set of genes
GSEA gene signature pathway enrichment analysis
updated 4.4 years ago by ★ 5.8k • written 4.4 years ago by ▴ 260
4
votes
4
replies
7.7k
views
How to add Hazard ratio value into Kaplan Meier plot?
kaplan meier Hazard Ratio r ggsurvplot
4.4 years ago by Raheleh ▴ 260
0
votes
1
reply
7.7k
views
Comment: C: How to add Hazard ratio value into Kaplan Meier plot?
4.4 years ago by Raheleh ▴ 260
0
votes
0
replies
1.3k
views
Comment: C: Problem with UpSetR result
4.4 years ago by Raheleh ▴ 260
0
votes
2
replies
1.3k
views
Problem with UpSetR result
UpSetR Intersections upset
updated 4.4 years ago by 5.7k • written 4.4 years ago by ▴ 260
9
votes
8
replies
9.5k
views
How to plot GSEA result?
GSEA plot fgsea r plotEnrichment
updated 4.4 years ago by ★ 1.3k • written 4.4 years ago by ▴ 260
0
votes
1
reply
9.5k
views
Comment: C: How to plot GSEA result?
4.4 years ago by Raheleh ▴ 260
0
votes
2
replies
19k
views
Comment: C: Clustering of DAVID gene enrichment results from gene expression studies
4.5 years ago by Raheleh ▴ 260
0
votes
2
replies
19k
views
Comment: C: Clustering of DAVID gene enrichment results from gene expression studies
4.5 years ago by Raheleh ▴ 260
0
votes
1
reply
1.1k
views
Comment: C: How to identify best predictors in lasso-penalised model?
4.6 years ago by Raheleh ▴ 260
0
votes
1
reply
1.1k
views
Comment: C: How to identify best predictors in lasso-penalised model?
4.6 years ago by Raheleh ▴ 260
2
votes
5
replies
1.1k
views
How to identify best predictors in lasso-penalised model?
lasso-penalised Coefficient predictor
updated 4.6 years ago by 27k • written 4.6 years ago by ▴ 260
0
votes
0
replies
6.4k
views
Comment: C: Building a predictive model by a list of genes
updated 4.6 years ago by 141k • written 4.6 years ago by ▴ 260
0
votes
1
reply
6.4k
views
Comment: C: Building a predictive model by a list of genes
4.6 years ago by Raheleh ▴ 260
0
votes
1
reply
6.4k
views
Comment: C: Building a predictive model by a list of genes
4.6 years ago by Raheleh ▴ 260
0
votes
1
reply
6.4k
views
Comment: C: Building a predictive model by a list of genes
4.6 years ago by Raheleh ▴ 260
0
votes
1
reply
6.4k
views
Comment: C: Building a predictive model by a list of genes
4.6 years ago by Raheleh ▴ 260
0
votes
1
reply
1.2k
views
Comment: C: huge difference of expression value of different probes for the same gene. Why?
4.6 years ago by Raheleh ▴ 260
4
votes
7
replies
1.2k
views
huge difference of expression value of different probes for the same gene. Why?
Probe ID of the same gene
updated 4.6 years ago by 82k • written 4.6 years ago by ▴ 260
0
votes
1
reply
1.2k
views
Comment: C: huge difference of expression value of different probes for the same gene. Why?
4.6 years ago by Raheleh ▴ 260
0
votes
0
replies
4.0k
views
Comment: C: Should the expression data be centered before PCA?
4.7 years ago by Raheleh ▴ 260
9
votes
20
replies
4.0k
views
Should the expression data be centered before PCA?
PCA Centering expression data
4.7 years ago by Raheleh ▴ 260
1
vote
1
reply
3.1k
views
how to use custom cdf in R to convert affyID to gene symbol?
affymetrix microarray custom cdf gene symbol
updated 4.9 years ago by 87k • written 7.4 years ago by ▴ 260
3
votes
4
replies
4.1k
views
Downstream analysis of VCF files obtained from VarScan2
WES VCF Somatic variations VarScan2 SnpEff
updated 5.0 years ago by ▴ 460 • written 5.4 years ago by ▴ 260
1
vote
1
reply
3.6k
views
Comment: C: Calling CNV using bcftools
5.2 years ago by Raheleh ▴ 260
2
votes
3
replies
3.6k
views
Calling CNV using bcftools
bcftools CNV vcf
updated 2.5 years ago by • 0 • written 5.2 years ago by ▴ 260
0
votes
1
reply
4.8k
views
Comment: C: Problem in converting vcf to maf using vcf2maf tools
5.2 years ago by Raheleh ▴ 260
4
votes
9
replies
4.8k
views
Problem in converting vcf to maf using vcf2maf tools
vcf2maf GRCh38 varscan
5.2 years ago by Raheleh ▴ 260
0
votes
1
reply
4.8k
views
Comment: A: Problem in converting vcf to maf using vcf2maf tools
5.2 years ago by Raheleh ▴ 260
0
votes
0
replies
4.8k
views
Comment: C: Problem in converting vcf to maf using vcf2maf tools
5.2 years ago by Raheleh ▴ 260
0
votes
1
reply
4.8k
views
Comment: C: Problem in converting vcf to maf using vcf2maf tools
5.2 years ago by Raheleh ▴ 260
2
votes
3
replies
1.3k
views
How to annotate Copy Number Variations (Output of VarScan2)
CNV VarScan annotation
updated 5.2 years ago by 161k • written 5.2 years ago by ▴ 260
0
votes
1
reply
95k
views
Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
5.2 years ago by Raheleh ▴ 260
2
votes
1
reply
3.0k
views
Problem in installing mclust package R
R mclust lgfortran
updated 5.3 years ago by 27k • written 5.3 years ago by ▴ 260
0
votes
2
replies
2.0k
views
Problem in using VarScan fpfilter
bam-readcount varscan fpfilter snp calling
updated 5.3 years ago by 20 • written 5.4 years ago by ▴ 260
0
votes
0
replies
7.9k
views
Comment: C: Problem in using picard.jar
5.4 years ago by Raheleh ▴ 260
0
votes
3
replies
7.9k
views
Comment: C: Problem in using picard.jar
updated 5.4 years ago by 47k • written 5.4 years ago by ▴ 260
0
votes
2
replies
7.9k
views
Comment: C: Problem in using picard.jar
updated 5.4 years ago by 47k • written 5.4 years ago by ▴ 260
8
votes
13
replies
7.9k
views
Problem in using picard.jar
picard
updated 5.4 years ago by 161k • written 5.4 years ago by ▴ 260
0
votes
1
reply
7.9k
views
Comment: C: Problem in using picard.jar
5.4 years ago by Raheleh ▴ 260
121 results • Page 2 of 3
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6