User: Nopstoc

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Nopstoc0
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Posts by Nopstoc

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TCGA biolinks GDCdownload file sizes mismatch
... Hello! I'm new to bioinformatics, and wanted to get some array data from TCGA, using TCGA biolinks. I ran a query for 12 files, 2 groups of 6 samples with the same type of cancer, and when I ran GDC download I get this confusing information: > GDCdownload(query) GDCdownload will download 12 f ...
tcgabiolinks R written 2.3 years ago by Nopstoc0
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TCGA Illumina Methylation 27 array data normalization
... Hi: I'm new to Bioinformatics, and I started to browse the TCGA database for methylation array files. I found some files from Illumina Methylation 27 that I pretended to use for analysis. My question is about the normalisation of the data: Are values across different files comparable? and if not, wh ...
R tcga methylation illumina written 2.3 years ago by Nopstoc0 • updated 2.3 years ago by Shicheng Guo7.4k

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