User: tsy19900929

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Posts by tsy19900929

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Answer: A: VCF file (annotated with snpeff) to MAF
... https://github.com/tsy19900929/snpeffToMaf ...
written 7 months ago by tsy199009290
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Answer: A: Issue converting VCF to MAF using snpEff annotations
... https://github.com/tsy19900929/snpeffToMaf ...
written 7 months ago by tsy199009290
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Comment: C: Bam To Bed With Read Nucleotide Sequences
... samtools view **-F 4** data.bam. some reads in the samfile may not map to ref ,but bamtobed ignore it. NC_000915.1 10 88 **readname2** 0 - **readname1** 117 NC_000915.1 11 0 * NC_000915.1 10 65 **readname3** 0 - **readname2** 185 NC_000915.1 ...
written 12 months ago by tsy199009290

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