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Posts by Yuyin110
Warning: no reference transcripts were found when map the reads to reference sequences by using stringtie
... I do the transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown following the step of the paper of "Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown", but at the step of mapping the reads to the reference sequence ...
... You can use UCSC find the annotion region, find the intron, exon or non-coding region, then confirm your location in which region. ...
... First you can use the UCSC find the gene and mRNA accession with your SNPs location, then following the mRNA accession, you can find the promoter region you want at DBTSS. ...
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