User: Yuyin110

gravatar for Yuyin110
Yuyin11010
Reputation:
10
Status:
New User
Location:
Last seen:
1 week, 3 days ago
Joined:
6 years, 8 months ago
Email:
y*************@163.com

Posts by Yuyin110

<prev • 4 results • page 1 of 1 • next >
0
votes
2
answers
5.5k
views
2
answers
Answer: A: LogFC and LogCPM
... If you use the flow path of trinity script get the LogFC and LogCPM, a step is that filtrate the gene which summary the all of the sample less than 2 ( rnaseqMatrix = rnaseqMatrix[rowSums(rnaseqMatrix)>=2,] ), so that 30.000 genes only 22.000 genes do the differential analysis. ...
written 10 days ago by Yuyin11010
0
votes
1
answer
939
views
1
answer
Warning: no reference transcripts were found when map the reads to reference sequences by using stringtie
... I do the transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown following the step of the paper of "Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown", but at the step of mapping the reads to the reference sequence ...
stringtie rna-seq written 11 months ago by Yuyin11010 • updated 3 months ago by Asbesto0
1
vote
4
answers
1.7k
views
4
answers
Answer: A: How To Annotate A Human Dna Position
... You can use UCSC find the annotion region, find the intron, exon or non-coding region, then confirm your location in which region. ...
written 6.7 years ago by Yuyin11010
0
votes
4
answers
1.4k
views
4
answers
Answer: A: Closest (Distance, Bp) Promotor To A Snp
... First you can use the UCSC find the gene and mRNA accession with your SNPs location, then following the mRNA accession, you can find the promoter region you want at DBTSS. ...
written 6.7 years ago by Yuyin11010

Latest awards to Yuyin110

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 697 users visited in the last hour