User: paul.elliot1994

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Posts by paul.elliot1994

<prev • 13 results • page 1 of 2 • next >
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Comment: C: CMSclassifier for colorectal cancer dataset
... Hello paul.elliot1994! We believe that this post does not fit the main topic of this site. Resolved For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with. If you disagree please tell us why in a reply below, we'll b ...
written 8 days ago by paul.elliot19940
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Comment: C: CMSclassifier for colorectal cancer dataset
... Woah! everything works perfectly now. I've been struggling with this for the past few days. Honestly, appreciate your help. Thank you so much. ...
written 8 days ago by paul.elliot19940
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Comment: C: CMSclassifier for colorectal cancer dataset
... Hi! thanks so much for the quick response.I used the following code to import the data data <- read.table("GSE103479_Normalised_matrix.txt", header = TRUE, sep = "\t") data_gpl <- read.table("GPL23985-23107.txt", header=TRUE, sep="\t") I get the following on using head(data) and ...
written 8 days ago by paul.elliot19940
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(Closed) CMSclassifier for colorectal cancer dataset
... Could someone give me suggestions on how I should prep my data to use it with CMS classifier, R package? I am currently working on subtyping colorectal cancer datasets using CMS and CRIS classifiers, R package. I am constantly running into errors everytime I run the command CMSdata <- probes ...
R microarray colorectal cancer cms written 8 days ago by paul.elliot19940
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Comment: C: Affymetrix microarray data analysis
... Thanks very much. It really helped. ...
written 16 days ago by paul.elliot19940
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Illumina bead array
... Hi! I am kind of new to the Illumina analysis in R. I was wondering, how do I know as to which one is the sample or the control file in GSE59857? and also which package should I used to do some quality checks for the same. Thank you. ...
R illumina written 16 days ago by paul.elliot19940
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Affymetrix microarray data analysis
... How do I load multiple cel files into R? and perform a QC check on the raw data? Also, how do I get the phenotype information from the data? The data I am using for this purpose is GSE20986. I am kind of new to this. So any help would be very much appreciated. Much thanks! ...
microarray written 5 weeks ago by paul.elliot19940
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Micro array cancer data analysis and Visualization
... Is there any microarray analysis visualisation package which can be used in the R environment? The package that performs both analysis and visualization. Thank you. ...
analysis visualization microarray cancer written 7 months ago by paul.elliot19940
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Pathway analysis of Protein-Protein interaction network
... I've a gene list of two diseases and i want to create a protein-protein interaction network and find out the common modules in the network and then perform a pathway analysis of the same. How do i do this? Thank you! ...
ppi network pathway analysis written 15 months ago by paul.elliot19940 • updated 15 months ago by Lars Juhl Jensen11k
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Comment: C: Identification of shared molecular pathways
... Thank you so much Mr. Jensen for the detailed explanation. Very helpful! God bless ...
written 15 months ago by paul.elliot19940

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