User: pourbiostars

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Posts by pourbiostars

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Comment: C: [OMA] When input sequence data are DNA, OMA conversion in AA ?
... Thank you for your answer, When comparing species (from the same plant taxonomy family) does using CDS sequence instead of AA matter when the clustering is done ? ...
written 6 months ago by pourbiostars0
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[OMA] When input sequence data are DNA, OMA conversion in AA ?
... Hello, I'm actually using [OMA][1] with this parameter: - " \# Type of input sequence data, has to be either 'DNA' or 'AA' InputDataType := 'DNA'; " So OMA knows that I'm using DNA sequences. But I find this parameter inside the parameter file: - " \# alignments which have a score lower ...
orthologs oma orthologous aa dna written 6 months ago by pourbiostars0 • updated 6 months ago by Christophe Dessimoz390
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Answer: A: [OMA] If my jobs stop (SGE) will the results be conserved (AllvsAll) in the cach
... It works great ! Thanks a lot ! ...
written 7 months ago by pourbiostars0
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Comment: C: Building OMA database on SGE
... It works ! Thank you ! ...
written 7 months ago by pourbiostars0
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[OMA] If my jobs stop (SGE) will the results be conserved (AllvsAll) in the cache folder ?
... Hi, I would like to know if the jobs are stopped because they're overruning the SGE server where i'm working on limit time, the results generated are conserved and not overwrited ? To be more precise: If I re-run the same job, will OMA take in count that some results are still here, and will cont ...
orthologs oma written 7 months ago by pourbiostars0

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