User: pavlo.maksimov

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Posts by pavlo.maksimov

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Answer: C: Different results between two methods for the extraction of SNPs, common for a s
... Dear RamRS, I figured out my problem. R produce the same results as excel. I had a mistake in the SnpSift filter. So now I have in all three variants (excel, R and SnpSift filter) the same output. What I have done in R: 1. I exported genotype data from my multiVCF file using following command ...
written 16 months ago by pavlo.maksimov20 • updated 16 months ago by _r_am32k
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Comment: C: Different results between two methods for the extraction of SNPs, common for a s
... Thank you very much for the tip. I'll try it now. ...
written 16 months ago by pavlo.maksimov20
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Different results between two methods for the extraction of SNPs, common for a subgroup from a multiVCF file
... Dear all, I try to get an subset of SNPs common for a three of six individuals from a multiVCF file. My problem is that I get different results when I do it 1. manually (extract genotypes using "snpsift extractFields" and filter the variants by the excel) 2. when I use "snpsift filter " ...
snpsift filter ngs snp multivcf written 16 months ago by pavlo.maksimov20

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