User: shohre73

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shohre730
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Posts by shohre73

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Comment: C: MaSuRCA Consensus error
... yes of course, they are not irrelevant. ...
written 2.6 years ago by shohre730
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Comment: C: MaSuRCA Consensus error
... Oh, you are right, I miss read the instructions and I thought I could also use single reads with PE. But again, I run MaSuRCA with two .fastq files and still the same error ...
written 2.6 years ago by shohre730
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MaSuRCA Consensus error
... Hi, I'm using MaSuRCA with a single .fastq file as PE input, and 5-consensus directory isn't made during the run time so of course it doesn't have access to it. can you tell me what is the cause of this? thanks. Here is the error recomputing A-stat for super-reads Fixing unitig consensus... ...
assembly tool written 2.6 years ago by shohre730 • updated 2.6 years ago by genomax73k
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Comment: C: IMAGE2 000_walk_all_raw.pl document missing
... Thanks for your reply :) As you said, I run image.pl, it gives me the instructions. The problem is when I try the first command, first it checks for additional programs like saaha2 and it finds them all, but in the first run says that they don't exist. So the output links are all broken. ...
written 2.6 years ago by shohre730
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IMAGE2 000_walk_all_raw.pl document missing
... Hi everyone I am a student of computer science and new to bioinformatics. I downloaded IMAGE2 from the link provided in the paper as "http://sourceforge.net/apps/mediawiki/image2/", But run.sh needs a perl file named '000_walk_all_raw.pl' which is missing. would you please tell me whether '000_walk_ ...
genome assembly sequence alignment software error written 2.9 years ago by shohre730

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