User: Rishikesh Lotke

Reputation:
0
Status:
New User
Last seen:
2 years, 8 months ago
Joined:
2 years, 11 months ago
Email:
r*************@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by Rishikesh Lotke

<prev • 3 results • page 1 of 1 • next >
0
votes
0
answers
786
views
0
answers
UCSC ENCODE Broad histone modifications genome version
... Hi everyone, I recently downloaded the histone modifications BAM and broadPeak files for GM12878 cells from UCSC (ENCODE histone modifications > Broad histone) from the link provided below: [http://genome-euro.ucsc.edu/cgi-bin/hgFileUi?db=hg19&g=wgEncodeBroadHistone][1] However, the 'Addit ...
0
votes
0
answers
1.1k
views
0
answers
MACS Lambda Local
... Hello everyone, Could someone please provide a working example (or point me to a good resource) of how 'lambda local' (along with lambda BG, 1k , 5k and 10k) is calculated for peak calling in MACS? λlocal=max (λBG, [λregion, λ1k], λ5k, λ10k) Does 'max' here mean the upper limit, based on whicheve ...
macs chip-seq written 2.9 years ago by Rishikesh Lotke0 • updated 2.9 years ago by Biostar ♦♦ 20
0
votes
0
answers
1.3k
views
0
answers
Data value in WIG file
... Hello everyone, Could some please explain to me what do the data values in a WIG file mean? I have read the docmentaion about this format on the UCSC webpage and also checked for an answer on the forum. This question is a bit similar to the one posted earlier: https://www.biostars.org/p/16261/ I ...
chip-seq written 2.9 years ago by Rishikesh Lotke0

Latest awards to Rishikesh Lotke

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1032 users visited in the last hour