User: ppawar

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ppawar0
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Posts by ppawar

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Missense Mutations Predictions
... Hi everyone, Is there anyone who knows if the SIFT, Polyphen-2 and SNAP-2 can be used to analyze the SNPs from bacterial genome? How to decide which SNPs are damaging if we get a bit different results from SIFT, Polyphen and SNAP? Should I consider the overlapping set between these three? ...
bacteria mutation snp written 7 months ago by ppawar0
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Molecular Docking, More Receptors, Single ligand
... Hello I want to know that is there any docking tool available which can dock two receptors and one ligand simultaneously. For example, if we want to dock an antigen with MHC and T-cell at the same time. Thanks ...
docking written 2.2 years ago by ppawar0 • updated 2.2 years ago by prasundutta87360
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comparing protein sequences to identify conserved regions
... Hello, I am new in field of bioinformatics. I have to do similarity search on protein sequences but the number of bacterial strain is large. There are various tools available for genome comparison but I don't know any tool that compare entire proteome of several bacterial strains. BLAST is used for ...
protein sequence conserved regions written 2.6 years ago by ppawar0 • updated 8 months ago by Biostar ♦♦ 20
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Compare genome of eight mycobacterial strain using ACT
... Hi, I am doing my research my research on Mycobacterium tuberculosis. Can I use ACT (Artemis Comparison Tool) from the Sanger institute for comparative analysis of eight Mycobacterial strain. Cheers. ...
comparative analysis genome alignment written 2.8 years ago by ppawar0 • updated 2.7 years ago by bioinfo1730

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